FFCP PHASE1:Hg19::chr22:23922448..23922495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3543 | |EntrezGene=3543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5870 | |HGNC=5870 | ||
|TSSclassifier=strong | |||
|UniProt=P15814,C9JEE0,Q0P681 | |UniProt=P15814,C9JEE0,Q0P681 | ||
|association_with_transcript=0bp_to_ENST00000330377,ENST00000438703,NM_020070,NM_152855,uc002zxd.2,uc002zxe.2_5end | |association_with_transcript=0bp_to_ENST00000330377,ENST00000438703,NM_020070,NM_152855,uc002zxd.2,uc002zxe.2_5end | ||
|cluster_id=chr22:23922448..23922495,- | |||
|coexpression_cluster_id=C2075 | |||
|description=CAGE_peak_1_at_IGLL1_5end | |description=CAGE_peak_1_at_IGLL1_5end | ||
|id=chr22:23922448..23922495,- | |id=chr22:23922448..23922495,- | ||
|ontology_enrichment_celltype=CL:0000037!4.94e-15!172;CL:0000566!4.94e-15!172;CL:0000988!1.13e-13!182;CL:0002032!5.16e-13!165;CL:0000837!5.16e-13!165;CL:0000763!2.09e-11!112;CL:0000049!2.09e-11!112 | |ontology_enrichment_celltype=CL:0000037!4.94e-15!172;CL:0000566!4.94e-15!172;CL:0000988!1.13e-13!182;CL:0002032!5.16e-13!165;CL:0000837!5.16e-13!165;CL:0000763!2.09e-11!112;CL:0000049!2.09e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000763;1.61e-07;100!CL:0000817;3.13e-07;1!CL:0000037;3.52e-07;1!CL:0001024;3.52e-07;1!CL:0002032;4.43e-07;1!CL:0000557;4.43e-07;1!CL:0000785;4.97e-07;1!CL:0000819;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.51e-13,168;CL:0002032,6.65e-13,161;CL:0000837,6.65e-13,161;CL:0000988,1.33e-12,177;CL:0000763,3.14e-12,108;CL:0000049,3.14e-12,108;CL:0000817,1.13e-08,3;CL:0001024,3.52e-07,1;CL:0000819,4.97e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.28e-41!51;DOID:0060083!9.28e-41!51;DOID:1240!1.17e-37!39;DOID:8692!4.64e-33!31;DOID:0050686!3.98e-10!137 | |ontology_enrichment_disease=DOID:2531!9.28e-41!51;DOID:0060083!9.28e-41!51;DOID:1240!1.17e-37!39;DOID:8692!4.64e-33!31;DOID:0050686!3.98e-10!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-45;31!DOID:1240;2.03e-42;39!DOID:2531;1.64e-32;51!DOID:0060083;1.64e-32;51!DOID:9119;3.32e-07;1!DOID:0060073;4.97e-07;1!DOID:8675;4.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.49e-51,39;DOID:2531,4.26e-47,51;DOID:0060083,4.26e-47,51;DOID:8692,8.22e-47,31;DOID:0050686,2.22e-14,137;DOID:9119,3.32e-07,1;DOID:0060073,4.97e-07,1;DOID:8675,4.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.69e-12;2!UBERON:0005058;7.69e-12;2!UBERON:0009113;7.69e-12;2!UBERON:0004177;3.40e-10;5!UBERON:0005057;3.40e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.11e-07,7;UBERON:0005057,2.11e-07,7 | |||
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| ||
|short_description=p1@IGLL1 | |short_description=p1@IGLL1 | ||
}} | }} |
Latest revision as of 09:03, 19 September 2015
Short description: | p1@IGLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGLL1_5end |
Coexpression cluster: | C2075_non_acute_CD133_CD34_granulocyte_diffuse_Burkitt |
Association with transcript: | 0bp_to_ENST00000330377, ENST00000438703, NM_020070, NM_152855, uc002zxd.2, uc002zxe.2_5end |
EntrezGene: | IGLL1 |
HGNC: | 5870 |
UniProt: | P15814C9JEE0Q0P681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.51e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.65e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.65e-13 | 161 |
hematopoietic cell | 1.33e-12 | 177 |
myeloid cell | 3.14e-12 | 108 |
common myeloid progenitor | 3.14e-12 | 108 |
precursor B cell | 1.13e-08 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.52e-07 | 1 |
B-1 B cell | 4.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.11e-07 | 7 |
immune organ | 2.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.49e-51 | 39 |
hematologic cancer | 4.26e-47 | 51 |
immune system cancer | 4.26e-47 | 51 |
myeloid leukemia | 8.22e-47 | 31 |
organ system cancer | 2.22e-14 | 137 |
acute myeloid leukemia | 3.32e-07 | 1 |
lymphatic system cancer | 4.97e-07 | 1 |
lymphosarcoma | 4.97e-07 | 1 |