FFCP PHASE1:Hg19::chr10:80828712..80828771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57178 | |EntrezGene=57178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16493 | |HGNC=16493 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULJ6,A0JLS3 | |UniProt=Q9ULJ6,A0JLS3 | ||
|association_with_transcript=-20bp_to_ENST00000334512,NM_020338,uc001kaf.2_5end | |association_with_transcript=-20bp_to_ENST00000334512,NM_020338,uc001kaf.2_5end | ||
|cluster_id=chr10:80828712..80828771,+ | |||
|description=CAGE_peak_1_at_ZMIZ1_5end | |description=CAGE_peak_1_at_ZMIZ1_5end | ||
|id=chr10:80828712..80828771,+ | |id=chr10:80828712..80828771,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.13e-22!76;CL:0002057!2.60e-22!42;CL:0000557!2.43e-19!71;CL:0000763!3.48e-19!112;CL:0000049!3.48e-19!112;CL:0000860!8.02e-19!45;CL:0000839!1.76e-18!70;CL:0002194!6.07e-18!63;CL:0000576!6.07e-18!63;CL:0000040!6.07e-18!63;CL:0000559!6.07e-18!63;CL:0002009!2.20e-17!65 | |ontology_enrichment_celltype=CL:0000766!1.13e-22!76;CL:0002057!2.60e-22!42;CL:0000557!2.43e-19!71;CL:0000763!3.48e-19!112;CL:0000049!3.48e-19!112;CL:0000860!8.02e-19!45;CL:0000839!1.76e-18!70;CL:0002194!6.07e-18!63;CL:0000576!6.07e-18!63;CL:0000040!6.07e-18!63;CL:0000559!6.07e-18!63;CL:0002009!2.20e-17!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-17;33!CL:0002057;5.38e-17;33!CL:0000473;2.60e-15;39!CL:0000234;2.60e-15;39!CL:0000576;4.89e-14;48!CL:0000766;6.50e-13;69!CL:0000763;1.20e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.04e-25,72;CL:0000473,1.56e-23,48;CL:0000234,1.56e-23,48;CL:0000860,2.60e-22,42;CL:0002057,2.60e-22,42;CL:0000557,3.46e-22,67;CL:0000839,2.89e-21,66;CL:0000763,3.02e-21,108;CL:0000049,3.02e-21,108;CL:0002194,6.92e-21,59;CL:0000576,6.92e-21,59;CL:0000040,6.92e-21,59;CL:0000559,6.92e-21,59;CL:0002009,3.39e-20,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-16;42!CL:0000049;2.45e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.34e-18!86;UBERON:0002371!2.01e-18!80;UBERON:0002405!1.00e-16!115;UBERON:0004765!4.65e-15!101;UBERON:0001434!4.65e-15!101;UBERON:0002390!5.31e-15!102;UBERON:0003061!5.31e-15!102;UBERON:0002193!3.11e-14!112;UBERON:0007023!2.30e-13!115;UBERON:0002204!2.09e-09!167;UBERON:0000062!3.00e-09!511;UBERON:0000468!4.46e-09!659;UBERON:0000467!7.46e-08!625;UBERON:0000480!1.35e-07!626;UBERON:0003081!3.12e-07!216;UBERON:0001049!8.74e-07!57;UBERON:0005068!8.74e-07!57;UBERON:0006241!8.74e-07!57;UBERON:0007135!8.74e-07!57 | |ontology_enrichment_uberon=UBERON:0001474!1.34e-18!86;UBERON:0002371!2.01e-18!80;UBERON:0002405!1.00e-16!115;UBERON:0004765!4.65e-15!101;UBERON:0001434!4.65e-15!101;UBERON:0002390!5.31e-15!102;UBERON:0003061!5.31e-15!102;UBERON:0002193!3.11e-14!112;UBERON:0007023!2.30e-13!115;UBERON:0002204!2.09e-09!167;UBERON:0000062!3.00e-09!511;UBERON:0000468!4.46e-09!659;UBERON:0000467!7.46e-08!625;UBERON:0000480!1.35e-07!626;UBERON:0003081!3.12e-07!216;UBERON:0001049!8.74e-07!57;UBERON:0005068!8.74e-07!57;UBERON:0006241!8.74e-07!57;UBERON:0007135!8.74e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.11e-21,82;UBERON:0002371,5.95e-21,76;UBERON:0004765,5.44e-18,90;UBERON:0002405,1.66e-17,93;UBERON:0002390,7.36e-17,98;UBERON:0003061,7.36e-17,98;UBERON:0001434,9.78e-17,100;UBERON:0002193,6.39e-16,108;UBERON:0007023,3.24e-13,114;UBERON:0002204,2.07e-10,167;UBERON:0003081,1.79e-08,203 | |||
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| ||
|short_description=p1@ZMIZ1 | |short_description=p1@ZMIZ1 | ||
}} | }} |
Latest revision as of 11:38, 19 September 2015
Short description: | p1@ZMIZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMIZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000334512, NM_020338, uc001kaf.2_5end |
EntrezGene: | ZMIZ1 |
HGNC: | 16493 |
UniProt: | Q9ULJ6A0JLS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.04e-25 | 72 |
defensive cell | 1.56e-23 | 48 |
phagocyte | 1.56e-23 | 48 |
classical monocyte | 2.60e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.60e-22 | 42 |
granulocyte monocyte progenitor cell | 3.46e-22 | 67 |
myeloid lineage restricted progenitor cell | 2.89e-21 | 66 |
myeloid cell | 3.02e-21 | 108 |
common myeloid progenitor | 3.02e-21 | 108 |
monopoietic cell | 6.92e-21 | 59 |
monocyte | 6.92e-21 | 59 |
monoblast | 6.92e-21 | 59 |
promonocyte | 6.92e-21 | 59 |
macrophage dendritic cell progenitor | 3.39e-20 | 61 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.11e-21 | 82 |
bone marrow | 5.95e-21 | 76 |
skeletal element | 5.44e-18 | 90 |
immune system | 1.66e-17 | 93 |
hematopoietic system | 7.36e-17 | 98 |
blood island | 7.36e-17 | 98 |
skeletal system | 9.78e-17 | 100 |
hemolymphoid system | 6.39e-16 | 108 |
adult organism | 3.24e-13 | 114 |
musculoskeletal system | 2.07e-10 | 167 |
lateral plate mesoderm | 1.79e-08 | 203 |