FFCP PHASE1:Hg19::chr22:26875443..26875461,-: Difference between revisions
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|id=chr22:26875443..26875461,-
|short_description=p6@HPS4
|description=CAGE_peak_6_at_HPS4_5end
|association_with_transcript=0bp_to_ENST00000496385_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496385_5end | |||
|cluster_id=chr22:26875443..26875461,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_6_at_HPS4_5end | |||
|id=chr22:26875443..26875461,- | |||
|ontology_enrichment_celltype=CL:0000037!5.87e-10!172;CL:0000566!5.87e-10!172;CL:0000763!1.85e-09!112;CL:0000049!1.85e-09!112;CL:0000988!6.91e-09!182;CL:0002032!1.84e-08!165;CL:0000837!1.84e-08!165;CL:0002274!2.49e-07!5;CL:0000457!2.49e-07!5;CL:0002191!2.49e-07!5;CL:0000097!2.49e-07!5;CL:0000831!2.49e-07!5;CL:0002028!2.49e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.44e-16;2!CL:0000558;1.44e-16;2!CL:0000817;8.67e-10;1!CL:0000785;9.43e-10;1!CL:0000819;9.43e-10;1!CL:0002032;1.91e-09;1!CL:0000037;1.91e-09;1!CL:0001024;1.91e-09;1!CL:0000557;1.91e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.52e-16,2;CL:0000765,2.52e-16,2;CL:0000050,2.52e-16,2;CL:0000038,2.52e-16,2;CL:0000558,2.52e-16,2;CL:0000547,2.52e-16,2;CL:0000549,2.52e-16,2;CL:0000550,2.52e-16,2;CL:0000552,2.52e-16,2;CL:0000817,3.49e-12,3;CL:0000037,1.61e-10,168;CL:0000763,6.89e-10,108;CL:0000049,6.89e-10,108;CL:0000988,7.84e-10,177;CL:0000819,9.44e-10,1;CL:0002032,1.18e-09,161;CL:0000837,1.18e-09,161;CL:0001024,2.35e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.64e-25;3 | |||
|ontology_enrichment_disease=DOID:1240!2.91e-31!39;DOID:2531!7.25e-29!51;DOID:0060083!7.25e-29!51;DOID:8692!3.66e-28!31;DOID:0050686!2.33e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.20e-23;31!DOID:1240;8.08e-21;39!DOID:2531;6.27e-17;51!DOID:0060083;6.27e-17;51!DOID:0060073;9.43e-10;1!DOID:8675;9.43e-10;1!DOID:9119;3.82e-09;1!DOID:8552;3.82e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.36e-27,39;DOID:2531,4.38e-24,51;DOID:0060083,4.38e-24,51;DOID:8692,8.70e-24,31;DOID:0060073,9.44e-10,1;DOID:8675,9.44e-10,1;DOID:9119,2.77e-09,1;DOID:8552,4.15e-09,1;DOID:0050686,1.82e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.71e-16!20;UBERON:0002619!1.40e-14!22;UBERON:0000956!1.64e-12!25;UBERON:0000203!1.64e-12!25;UBERON:0001049!7.47e-11!57;UBERON:0005068!7.47e-11!57;UBERON:0006241!7.47e-11!57;UBERON:0007135!7.47e-11!57;UBERON:0001869!1.38e-10!32;UBERON:0002616!2.56e-10!59;UBERON:0002791!3.57e-10!33;UBERON:0000955!4.47e-10!69;UBERON:0006238!4.47e-10!69;UBERON:0002020!8.77e-10!34;UBERON:0003528!8.77e-10!34;UBERON:0001893!8.77e-10!34;UBERON:0001017!1.44e-08!82;UBERON:0000073!2.51e-08!94;UBERON:0001016!2.51e-08!94;UBERON:0005743!6.38e-08!86;UBERON:0002780!1.36e-07!41;UBERON:0001890!1.36e-07!41;UBERON:0006240!1.36e-07!41;UBERON:0003080!2.42e-07!42;UBERON:0002021!6.64e-07!5;UBERON:0002771!9.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.71e-13;6!UBERON:0002680;7.23e-09;9!UBERON:0001895;7.23e-09;9!UBERON:0004733;9.27e-07;12!UBERON:0002028;9.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.62e-13,6;UBERON:0006215,4.62e-13,6;UBERON:0002680,7.14e-09,9;UBERON:0001895,7.14e-09,9;UBERON:0010092,7.14e-09,9;UBERON:0004733,9.19e-07,12;UBERON:0002028,9.19e-07,12;UBERON:0007277,9.19e-07,12 | |||
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| ||
|short_description=p6@HPS4 | |||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p6@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HPS4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000496385_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.52e-16 | 2 |
erythroblast | 2.52e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 2.52e-16 | 2 |
erythroid progenitor cell | 2.52e-16 | 2 |
reticulocyte | 2.52e-16 | 2 |
proerythroblast | 2.52e-16 | 2 |
basophilic erythroblast | 2.52e-16 | 2 |
polychromatophilic erythroblast | 2.52e-16 | 2 |
orthochromatic erythroblast | 2.52e-16 | 2 |
precursor B cell | 3.49e-12 | 3 |
hematopoietic stem cell | 1.61e-10 | 168 |
myeloid cell | 6.89e-10 | 108 |
common myeloid progenitor | 6.89e-10 | 108 |
hematopoietic cell | 7.84e-10 | 177 |
B-1 B cell | 9.44e-10 | 1 |
hematopoietic oligopotent progenitor cell | 1.18e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-09 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.35e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.62e-13 | 6 |
rhombic lip | 4.62e-13 | 6 |
regional part of metencephalon | 7.14e-09 | 9 |
metencephalon | 7.14e-09 | 9 |
future metencephalon | 7.14e-09 | 9 |
segmental subdivision of hindbrain | 9.19e-07 | 12 |
hindbrain | 9.19e-07 | 12 |
presumptive hindbrain | 9.19e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.36e-27 | 39 |
hematologic cancer | 4.38e-24 | 51 |
immune system cancer | 4.38e-24 | 51 |
myeloid leukemia | 8.70e-24 | 31 |
lymphatic system cancer | 9.44e-10 | 1 |
lymphosarcoma | 9.44e-10 | 1 |
acute myeloid leukemia | 2.77e-09 | 1 |
chronic myeloid leukemia | 4.15e-09 | 1 |
organ system cancer | 1.82e-07 | 137 |