FFCP PHASE1:Hg19::chr10:81045353..81045373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57178 | |EntrezGene=57178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16493 | |HGNC=16493 | ||
|TSSclassifier=strong | |||
|UniProt=D4YW76 | |UniProt=D4YW76 | ||
|association_with_transcript=143bp_to_AF357909_5end | |association_with_transcript=143bp_to_AF357909_5end | ||
|cluster_id=chr10:81045353..81045373,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_29_at_ZMIZ1_5end | |description=CAGE_peak_29_at_ZMIZ1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!6.54e-82!42;CL:0000860!7.95e-76!45;CL:0002009!1.63e-65!65;CL:0002194!3.72e-64!63;CL:0000576!3.72e-64!63;CL:0000040!3.72e-64!63;CL:0000559!3.72e-64!63;CL:0000557!3.43e-59!71;CL:0002087!6.38e-58!119;CL:0000766!9.73e-58!76;CL:0000839!7.90e-57!70;CL:0002031!3.22e-55!124;CL:0000738!2.50e-54!140;CL:0000988!1.07e-44!182;CL:0002032!2.41e-42!165;CL:0000837!2.41e-42!165;CL:0000037!5.91e-42!172;CL:0000566!5.91e-42!172;CL:0000763!3.79e-38!112;CL:0000049!3.79e-38!112;CL:0002393!1.89e-15!9;CL:0002397!1.89e-15!9;CL:0000134!1.58e-14!358;CL:0002320!5.24e-14!365;CL:0000219!3.54e-12!390;CL:0000048!5.38e-10!430;CL:0000723!1.10e-09!436;CL:0000034!2.74e-09!444;CL:0000080!9.64e-09!6 | |ontology_enrichment_celltype=CL:0002057!6.54e-82!42;CL:0000860!7.95e-76!45;CL:0002009!1.63e-65!65;CL:0002194!3.72e-64!63;CL:0000576!3.72e-64!63;CL:0000040!3.72e-64!63;CL:0000559!3.72e-64!63;CL:0000557!3.43e-59!71;CL:0002087!6.38e-58!119;CL:0000766!9.73e-58!76;CL:0000839!7.90e-57!70;CL:0002031!3.22e-55!124;CL:0000738!2.50e-54!140;CL:0000988!1.07e-44!182;CL:0002032!2.41e-42!165;CL:0000837!2.41e-42!165;CL:0000037!5.91e-42!172;CL:0000566!5.91e-42!172;CL:0000763!3.79e-38!112;CL:0000049!3.79e-38!112;CL:0002393!1.89e-15!9;CL:0002397!1.89e-15!9;CL:0000134!1.58e-14!358;CL:0002320!5.24e-14!365;CL:0000219!3.54e-12!390;CL:0000048!5.38e-10!430;CL:0000723!1.10e-09!436;CL:0000034!2.74e-09!444;CL:0000080!9.64e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.95e-85;33!CL:0002057;6.95e-85;33!CL:0000473;2.77e-62;39!CL:0000234;2.77e-62;39!CL:0000576;2.33e-38;48!CL:0000766;1.40e-22;69!CL:0000763;4.55e-09;100!CL:0002087;8.33e-09;104 | |ontology_enrichment_celltype_v019=CL:0000860;6.95e-85;33!CL:0002057;6.95e-85;33!CL:0000473;2.77e-62;39!CL:0000234;2.77e-62;39!CL:0000576;2.33e-38;48!CL:0000766;1.40e-22;69!CL:0000763;4.55e-09;100!CL:0002087;8.33e-09;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-69,42;CL:0002057,1.16e-69,42;CL:0000473,4.09e-68,48;CL:0000234,4.09e-68,48;CL:0002194,4.49e-54,59;CL:0000576,4.49e-54,59;CL:0000040,4.49e-54,59;CL:0000559,4.49e-54,59;CL:0002009,2.91e-52,61;CL:0000839,3.34e-48,66;CL:0000557,1.84e-47,67;CL:0000766,4.60e-44,72;CL:0002087,3.08e-30,115;CL:0002031,6.78e-29,120;CL:0000763,8.88e-29,108;CL:0000049,8.88e-29,108;CL:0000738,2.99e-25,136;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.30e-51;42!CL:0000049;1.64e-10;108 | |ontology_enrichment_development_v019=CL:0002057;4.30e-51;42!CL:0000049;1.64e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-55!102;UBERON:0003061!2.37e-55!102;UBERON:0002371!1.83e-51!80;UBERON:0002193!1.97e-49!112;UBERON:0001474!3.34e-47!86;UBERON:0004765!9.52e-39!101;UBERON:0001434!9.52e-39!101;UBERON:0002405!1.14e-38!115;UBERON:0003081!2.90e-20!216;UBERON:0002204!1.49e-19!167;UBERON:0002384!2.68e-13!375 | |ontology_enrichment_uberon=UBERON:0002390!2.37e-55!102;UBERON:0003061!2.37e-55!102;UBERON:0002371!1.83e-51!80;UBERON:0002193!1.97e-49!112;UBERON:0001474!3.34e-47!86;UBERON:0004765!9.52e-39!101;UBERON:0001434!9.52e-39!101;UBERON:0002405!1.14e-38!115;UBERON:0003081!2.90e-20!216;UBERON:0002204!1.49e-19!167;UBERON:0002384!2.68e-13!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-41,76;UBERON:0001474,1.71e-38,82;UBERON:0004765,6.49e-35,90;UBERON:0002405,9.94e-34,93;UBERON:0002390,6.51e-32,98;UBERON:0003061,6.51e-32,98;UBERON:0001434,3.09e-31,100;UBERON:0002193,8.88e-29,108;UBERON:0002204,7.51e-18,167;UBERON:0003081,2.85e-14,203;UBERON:0000926,2.62e-08,315;UBERON:0004120,2.62e-08,315;UBERON:0006603,2.62e-08,315;UBERON:0002384,1.05e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.472264687882075,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,1.51150377475524,0.970336244751265,1.16214518452842,2.05583944010913,3.09706370895104,5.17846306179871,4.09857130446561,5.67557351732605,0.689491361473237,0.645484683583826,0,0.564727018627814,1.63743690034707,1.79778787556068,0.306083892370903,1.60464513538047,1.27867425159808,0.329851300186716,1.79517291859469,2.13112375266347,0,0,1.24564449799115,9.54744927975624,10.9511412868242,6.73285418585862,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.494255755786011,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.472264687882075,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,1.51150377475524,0.970336244751265,1.16214518452842,2.05583944010913,3.09706370895104,5.17846306179871,4.09857130446561,5.67557351732605,0.689491361473237,0.645484683583826,0,0.564727018627814,1.63743690034707,1.79778787556068,0.306083892370903,1.60464513538047,1.27867425159808,0.329851300186716,1.79517291859469,2.13112375266347,0,0,1.24564449799115,9.54744927975624,10.9511412868242,6.73285418585862,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.494255755786011,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p29@ZMIZ1 | |short_description=p29@ZMIZ1 | ||
}} | }} |
Latest revision as of 12:56, 19 September 2015
Short description: | p29@ZMIZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_ZMIZ1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 143bp_to_AF357909_5end |
EntrezGene: | ZMIZ1 |
HGNC: | 16493 |
UniProt: | D4YW76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.16e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-69 | 42 |
defensive cell | 4.09e-68 | 48 |
phagocyte | 4.09e-68 | 48 |
monopoietic cell | 4.49e-54 | 59 |
monocyte | 4.49e-54 | 59 |
monoblast | 4.49e-54 | 59 |
promonocyte | 4.49e-54 | 59 |
macrophage dendritic cell progenitor | 2.91e-52 | 61 |
myeloid lineage restricted progenitor cell | 3.34e-48 | 66 |
granulocyte monocyte progenitor cell | 1.84e-47 | 67 |
myeloid leukocyte | 4.60e-44 | 72 |
nongranular leukocyte | 3.08e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 6.78e-29 | 120 |
myeloid cell | 8.88e-29 | 108 |
common myeloid progenitor | 8.88e-29 | 108 |
leukocyte | 2.99e-25 | 136 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-41 | 76 |
bone element | 1.71e-38 | 82 |
skeletal element | 6.49e-35 | 90 |
immune system | 9.94e-34 | 93 |
hematopoietic system | 6.51e-32 | 98 |
blood island | 6.51e-32 | 98 |
skeletal system | 3.09e-31 | 100 |
hemolymphoid system | 8.88e-29 | 108 |
musculoskeletal system | 7.51e-18 | 167 |
lateral plate mesoderm | 2.85e-14 | 203 |
mesoderm | 2.62e-08 | 315 |
mesoderm-derived structure | 2.62e-08 | 315 |
presumptive mesoderm | 2.62e-08 | 315 |
connective tissue | 1.05e-07 | 371 |