FFCP PHASE1:Hg19::chr12:57623963..57623989,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6472 | |EntrezGene=6472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10852 | |HGNC=10852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000557302_5end | |association_with_transcript=9bp_to_ENST00000557302_5end | ||
|cluster_id=chr12:57623963..57623989,+ | |||
|coexpression_cluster_id=C2221 | |||
|description=CAGE_peak_4_at_SHMT2_5end | |description=CAGE_peak_4_at_SHMT2_5end | ||
|id=chr12:57623963..57623989,+ | |id=chr12:57623963..57623989,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.86e-30!679;CL:0000004!1.86e-30!679;CL:0000255!1.86e-30!679;CL:0000012!3.37e-29!682;CL:0000144!5.57e-21!625;CL:0002371!3.19e-18!591;CL:0000003!1.60e-17!722;CL:0000063!1.86e-17!578;CL:0000055!8.20e-17!180;CL:0000057!1.67e-12!75;CL:0002321!4.66e-12!248;CL:0000220!5.08e-12!246;CL:0000066!4.41e-11!254;CL:0000222!4.57e-10!119;CL:0000048!9.03e-07!430;CL:0000359!9.87e-07!32 | |ontology_enrichment_celltype=CL:0000548!1.86e-30!679;CL:0000004!1.86e-30!679;CL:0000255!1.86e-30!679;CL:0000012!3.37e-29!682;CL:0000144!5.57e-21!625;CL:0002371!3.19e-18!591;CL:0000003!1.60e-17!722;CL:0000063!1.86e-17!578;CL:0000055!8.20e-17!180;CL:0000057!1.67e-12!75;CL:0002321!4.66e-12!248;CL:0000220!5.08e-12!246;CL:0000066!4.41e-11!254;CL:0000222!4.57e-10!119;CL:0000048!9.03e-07!430;CL:0000359!9.87e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.35e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-12,76;CL:0002321,3.78e-10,250;CL:0000222,5.54e-10,121;CL:0000048,2.20e-07,427;CL:0000723,2.65e-07,433;CL:0000066,2.84e-07,253;CL:0000359,3.11e-07,32;CL:0000192,3.81e-07,43;CL:0000514,3.81e-07,43;CL:0000034,9.70e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.95e-11!84;UBERON:0000055!3.18e-11!69;UBERON:0001981!1.11e-10!60;UBERON:0007500!1.11e-10!60;UBERON:0004537!1.11e-10!60;UBERON:0006965!1.11e-10!60;UBERON:0002049!2.07e-10!79;UBERON:0007798!2.07e-10!79;UBERON:0003914!3.12e-10!118;UBERON:0001637!9.65e-10!42;UBERON:0003509!9.65e-10!42;UBERON:0004572!9.65e-10!42;UBERON:0000490!1.41e-08!138;UBERON:0004573!9.83e-08!33;UBERON:0004571!9.83e-08!33;UBERON:0002100!1.75e-07!216;UBERON:0004535!2.80e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.93e-08;42!UBERON:0003509;7.93e-08;42!UBERON:0004572;7.93e-08;42!UBERON:0004573;1.28e-07;33!UBERON:0004571;1.28e-07;33!UBERON:0007500;3.19e-07;56!UBERON:0001981;3.19e-07;56!UBERON:0004537;3.19e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.58e-11,83;UBERON:0000055,3.73e-11,68;UBERON:0003914,1.23e-10,117;UBERON:0007500,1.23e-10,59;UBERON:0001981,1.23e-10,59;UBERON:0004537,1.23e-10,59;UBERON:0006965,1.23e-10,59;UBERON:0001637,1.62e-10,42;UBERON:0003509,1.62e-10,42;UBERON:0004572,1.62e-10,42;UBERON:0002049,4.62e-10,78;UBERON:0007798,4.62e-10,78;UBERON:0000490,1.42e-08,148;UBERON:0004573,2.83e-08,33;UBERON:0004571,2.83e-08,33;UBERON:0004535,7.75e-08,109;UBERON:0002100,2.94e-07,199;UBERON:0001009,4.70e-07,112 | |||
|phase1_expression=8.3572054464456,4.28201047781966,7.89344662937438,8.00586386825043,8.04529969969118,9.59572376510406,2.53299878168311,3.15859936713415,3.13422753839806,1.47440361900905,7.6758128476967,0.218441372130172,0.791300934685361,0.247532705920093,0,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,0,0,1.25381888591235,0.286235987131057,0,0.125542639594803,0.993374274723366,0.410502947249729,0.787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,2.75826367343678,1.50602959389125,14.4204063965047,0.774672005803016,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,1.16214518452842,5.75635043230556,3.40677007984614,1.7261543539329,4.61089271752381,2.12834006899727,2.06847408441971,2.5819387343353,1.35426486594342,0.188242339542605,2.45615535052061,1.57306439111559,3.67300670845083,6.41858054152187,8.95071976118658,0,0.598390972864896,0.852449501065388,6.38460324982885,13.0498601678962,10.5879782329248,0.502497330513487,3.65038042894141,0.868755378820466,3.02699751316684,8.10210799172642,9.81033401066742,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,6.52099065402005,6.86734389530676,20.0535164254356,14.3398053771215,3.1811437882044,12.1658717575659,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,6.19301990097322,2.22470665670658,0.324547393654683,0.348259474598534,0,0,0,0,11.3294572199022,1.72046919021225,4.85996702250632,2.82653970962005,4.61449379830897,6.32771496462155,4.59788926380983,0.775250277507987,0,2.00832367658802,1.20848795132744,3.80136052859256,0.976248230192678,4.04429388380456,4.86085168729056,1.60739510911344,2.46982309888787,4.50445921933289,6.13266549863533,10.4419222552494,5.31285057398181,0,0,3.48875241714027,7.9515512271251,4.05217637326655,3.04541115870403,4.87622255272983,1.77334191099179,3.36406560085384,9.60740961567345,9.37336683985208,0.933633106199299,9.69916838901754,2.45192854670188,4.69208025699287,4.03323147135999,28.821536115557,0.624320153660641,5.13424639390004,2.24173020827702,5.28455243896942,3.39933183173076,0.98315564691574,1.63323337003915,1.10550885580591,8.98934296229159,4.75201142912821,9.39614331258516,10.0117749813183,24.4330168217521,1.0100166837244,1.87677779807946,1.10825646193673,3.5118209670467,5.21029252858333,8.71380741658261,2.26864366320042,1.07633781413317,10.6778694409284,6.99375273826554,2.40072876867522,7.11062451745228,5.41045134095821,9.86419338557426,2.19409231913646,6.23596833031671,3.02920529092937,7.64014158731085,6.30419621593366,2.4850671476163,2.61955455391865,1.52604533079439,0.386521706326594,0.818238361772504,0.286804595389004,2.19552671033272,0.795178609928912,1.16193942869518,0.414644220061482,1.51392510525377,0.72995471815166,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,1.77460200059766,0.842923450390509,0.723033089650446,0.55146986366197,1.30727666455444,0.949082476444386,0.269662616320329,0,0.769494313892781,0.738155454624648,7.01208869017229,1.2347220339942,0,1.26755034821831,16.7080626835196,2.95394953340702,0,0.983907508344908,2.05881372358231,0.439001141634502,15.7362454560667,1.3068766413512,1.75918045801206,42.3550796903422,3.11980435583874,2.88662684050547,0.34779121492523,4.69634776943287,1.44366447761074,2.77791307545966,2.28304982681518,0,0.858486162094873,0,0.234004265139238,0,0.93733833986777,1.00789276919316,0.425325291727159,5.82130397568514,5.23141089325132,0.766765358330422,0.492663237895943,1.93706554829097,0,0,0.25248486685276,0.063497894292169,3.81988425558278,1.17217447210047,3.4214489204541,0.514137463516618,2.10240140490742,4.28739648945867,4.48524337381443,3.48768055066624,2.4935017179123,2.84397774667111,17.8828222925941,1.690605505112,3.19125739901845,4.16029747645464,0.514414748524284,0,1.0656887160644,6.71996570193294,35.2704043504438,1.64648067356154,0.977208552881205,9.95097456479128,0,0,1.74306691720059,0.199945982364114,3.64871341923571,0.502257091432126,0,4.79249710983165,8.04033550838797,0,3.18518874668674,0.821905290201534,0.358121926479791,7.28553435957927,0.197030760201927,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,6.51036056879365,3.53550464602372,5.70972764150918,7.254311091561,7.84847480451178,8.12554469264841,13.6444502433591,15.5209606938757,1.99267679560631,2.21243002250044,1.99832313276591,2.54541504701563,1.71571711905428,0.206768026122887,0,0.106727557803444,1.81876542867756,6.65741758041988,5.44302527993425,6.94701861892575,4.910783145218,7.85848264412606,6.66323576129645,5.62877973973374,9.32952742632923,7.42090332224955,0.462629081407967,2.30830242907065,0.821271560138091,1.03850885836724,0.348631135379878,0.483437798366489,0.40101294060657,1.56537681191024,6.7740524417118,6.55528204824181,4.45823010862042,6.31679458070376,1.61732207919271,4.70609861506113,0,0,1.13733384070897,2.38131187387122,0.863663664408557,0,0.270946437543853,0,4.33289664176565,15.7904441696458,0.671624264166535,0.219259876645935,0,0.256450125116389,0,10.4121086292577,1.44257416306811,0.640986253728404,0.330037999682352,2.87132768998086,0,11.2478750890912,10.9237911670098,0.924291702687866,1.5350367472613,1.10269257987624,2.25582514223375,0.290033387828457,1.27839941124151,1.95870478422822,10.7435194984636,9.03293316615999,0.510450849978337,8.69956915357729,7.43752878875657,2.20368642781448,2.7881490806424,7.39280592422613,1.06461206063404,4.34966496037536,7.96894142146856,10.4481167321654,0.744316738719335,0,1.33441135746677,2.303080121802,11.9822916649498,5.09125196681499,13.3441268833869,0.359744915166629,1.64722217841633,1.64937363283961,2.62837226045311,7.92551605865041,1.68503382495592,4.8763373908959,7.06769119930725,13.7345190783782,3.68549760801562,4.3835683905651,1.13008116620243,3.85955740482287,11.941901554342,7.0152141640602,0.578775534266688,0,7.50768394762005,3.717881977197,4.50712964051586,2.72481569187698,8.3511684861153,7.49009208110625,2.48332744849418,6.12212142363226,6.91519275215794,4.55367808518858,19.596344333719,11.0655429634339,2.01090682660736,14.1558280319719,1.69458841398202,3.01353760869861,1.68471475667626,2.66058092122005,2.06751060186264,0.507447609232169,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,1.48642540100575,0,1.06712765022621,0,0.399158742865633,0.383010740264733,15.6638451215673,0.324621940274555,0,0,0.313359791546046,2.50634477090067,0.677167111206413,0.321176150207399,0.605399121573143,4.25846237690326,1.71752672377882,0.614481528616916,0.671028323677248,0.667396566847634,2.34465714482448,0.278406173895242,0,2.70455678475983,1.33228787199128,0,0.748562161632879,0.293016358543788,0,2.00598091699461,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.281338832821026,22.0391235945354,2.80166586185491,0,0.398495976502139,0,0,1.02268682502155,2.09244169283818,2.17727711363265,4.49341755736634,0.895105873378046,7.1620131831762,0.197286811273867,0,0,0,0.185536196323703,0,3.64598865519327,0.61221999997337,0,2.84483620713749,0,0.236387681767936,0.344743373241465,0,2.77799991893268,0,0.361789315876224,0,0,0,0,3.05027697853172,1.95193241990045,0,6.83652335082007,2.07507513949254,4.48788222048861,1.84700532267414,1.27600463892768,2.28993983504656,2.13213910407454,0,0.156980256395025,0.498635045700469,0.225595660617181,0,0,0.189753732724185,0.635746315921515,0.632994193584081,1.30586246527318,0.282706142867882,1.08194319871046,0,0.265372693510018,0,4.15129580152871,5.18968543575312,3.23708043466912,0.134802265961354,0,0.234264445725339,5.47364367646998,1.76098157038881,2.42780379534093,0,0,0,1.39010475182674,14.4310482637913,0.207376382794494,7.31119259977904,5.29587129400798,8.47618879699508,11.9472429772959,3.69992409838731,6.1016856125781,0.347119476670262,1.27390116638691,2.08942095792966,0,0.343972064943233,2.70917727609438,6.13950263523959,2.38134825454307,0.0969890164884194,1.76512253383001,0.451961481561065,3.01492234222852,1.19228767021794,0,0.586654148204409,0,0,4.79543062997113,5.61952626901013,0.229073192331831,1.54435498075768,3.16920555573929,2.36079817574322,3.29971648463514,0.407712618220842,0.627617077873999,1.32597682927218,2.60055530911367,0,1.09524303113594,0,1.28929632425987,2.10309883423452,0.558564802544508,0,3.58936512288407,0.199679000498991,0,0.669514372325618,0.0671834724867263,3.24269895188163,5.82479747637269,1.73323001075892,1.15382201733633,1.81989568406299,4.52766414967844,3.64095327882873,0,0.136203406111576,0.643012593860077,0.412618309791701,0,0,0,0,0,0.394028536495991,0.786818822024972,4.64641480685389,16.3151478792889,13.4340638123612,0,0,0,2.71499800876856,0,0.653174720218818,1.19730191562487,3.44788587147224,0.340776043570843,0.339936274560377,8.50002955332878,1.32506888912221,0.517131825446202,0.79339561045614,2.22412889249628,0,0.640724475406168,0,0.414239055347196,0.496166021811951,4.14984426985683,0.243585196761792,5.74507131993164,0,1.0027595760908,0,0.327872630709804,2.19875734750328,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.248385611765534,1.38348634936231,0.124980407962107,5.76266646658262,5.42384133735438,14.3512150015885,0,0.144921028610825,1.94031243752936,7.71253922495841,7.76728206103659,3.59865710022669,4.52822223154635,1.77962244319307,24.028207181677,4.38569678913393,3.57505561340395,1.92211694986524,1.91156120596443,23.3897618325074,2.32894435314389,0.829412415681711,3.45594228925393,3.65221543268214,1.50257608997218,1.14241563650639,0.813741466409323,2.72772988803839,9.3447184626965,10.6727764772054,4.77715066438339,0.400027764663154,2.74716564146234,6.39824028655246,5.04739592914604,0.385239660814607,0.214441591374926,17.225623269704,4.53411851024545,0.463044948647668,10.2789415892716,1.07453304648892,1.54400723580486,9.64849818146311,1.41351316756705,3.8582807654183,9.291834235919,2.04993214870357,1.72715170865599,4.25403938648335,0,0,0.132864840313363,0,13.1043939538565,0.491545817507439,5.4941152073243,0.19998739585493,2.3472180532711,7.40524412541507,1.70254786070051,1.84105950251841,7.55349341685,2.48830904013189,0.511577485214607,0.539124056983409,3.77438260454151,0.109209638192014,0,0,0.371807292777007,0,6.04208266241495,3.86422550506141,1.60114149657094,8.11154670488573,3.062454773532,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,0,4.90738592505128,0.471878893390961,2.75142897782519,6.12286030596793,5.33934933654034,13.807198521202,1.98916222116275,0.451261970095544,0.40341013740704,1.56302802246618,1.30953347240711,11.9553499782371,1.33070477595341,0.0675375846183947,0,0,0,0,5.48257766857182,0.496211178389294,0,12.1374306257616,0,0.336283722218824,0,0,0.266107110487916,3.3417856391176,3.25827217931095,0,0,2.83665218121524,0.778619813244484,0.078493092850514,0,3.36326595976547,0,0.215927591218621,1.43325506366115,0.142953088353313,0.158013611732727,0,1.91244099532837,8.81882501203278,3.10824246244555,0.17071847709395,0,0,17.2764721066625,23.1780460944909,0,1.60374807980835,3.72247662797184,0.955538938977433,3.69122924932715,2.84635677484205,0,0,0,0,0,0.701818390386317,0.795803100645473,0.356760272332706,6.32498059418176,0.109940516745429,15.3982100438007,0.0771741581079447,0,4.70317296361523,0,12.2551804492845,0.392616934229891,0,0,4.24817786719542,0.845855261818682,1.74036297528658,0.199882311849858,2.67830907908486,8.11658204946091,1.04313776695919,0,0.917458566809082,0.573358332605805,0,0,0,0,2.23197010900051,5.0839319149456,1.29787968637137,0.504665699340316,0.218531143927391,0.253397002022874,1.01988829741982,1.87052183685892,1.19463369395298,0.50141507858475,0,0.267964130156178,0,0.517164979309476,0.426467963801962,0.23806443146374,0,0.0620747142958579,7.06430734257865,0.381882949668989,0,0.217716747896961,0,0.471464371102113,0.717222053926764,0,1.54666210360852,6.51036809854064,1.9307228228694,17.6955648149976,2.34640942403454,0,0,1.99727032255654,0.201273793591026,2.24397944612263 | |phase1_expression=8.3572054464456,4.28201047781966,7.89344662937438,8.00586386825043,8.04529969969118,9.59572376510406,2.53299878168311,3.15859936713415,3.13422753839806,1.47440361900905,7.6758128476967,0.218441372130172,0.791300934685361,0.247532705920093,0,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,0,0,1.25381888591235,0.286235987131057,0,0.125542639594803,0.993374274723366,0.410502947249729,0.787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,2.75826367343678,1.50602959389125,14.4204063965047,0.774672005803016,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,1.16214518452842,5.75635043230556,3.40677007984614,1.7261543539329,4.61089271752381,2.12834006899727,2.06847408441971,2.5819387343353,1.35426486594342,0.188242339542605,2.45615535052061,1.57306439111559,3.67300670845083,6.41858054152187,8.95071976118658,0,0.598390972864896,0.852449501065388,6.38460324982885,13.0498601678962,10.5879782329248,0.502497330513487,3.65038042894141,0.868755378820466,3.02699751316684,8.10210799172642,9.81033401066742,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,6.52099065402005,6.86734389530676,20.0535164254356,14.3398053771215,3.1811437882044,12.1658717575659,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,6.19301990097322,2.22470665670658,0.324547393654683,0.348259474598534,0,0,0,0,11.3294572199022,1.72046919021225,4.85996702250632,2.82653970962005,4.61449379830897,6.32771496462155,4.59788926380983,0.775250277507987,0,2.00832367658802,1.20848795132744,3.80136052859256,0.976248230192678,4.04429388380456,4.86085168729056,1.60739510911344,2.46982309888787,4.50445921933289,6.13266549863533,10.4419222552494,5.31285057398181,0,0,3.48875241714027,7.9515512271251,4.05217637326655,3.04541115870403,4.87622255272983,1.77334191099179,3.36406560085384,9.60740961567345,9.37336683985208,0.933633106199299,9.69916838901754,2.45192854670188,4.69208025699287,4.03323147135999,28.821536115557,0.624320153660641,5.13424639390004,2.24173020827702,5.28455243896942,3.39933183173076,0.98315564691574,1.63323337003915,1.10550885580591,8.98934296229159,4.75201142912821,9.39614331258516,10.0117749813183,24.4330168217521,1.0100166837244,1.87677779807946,1.10825646193673,3.5118209670467,5.21029252858333,8.71380741658261,2.26864366320042,1.07633781413317,10.6778694409284,6.99375273826554,2.40072876867522,7.11062451745228,5.41045134095821,9.86419338557426,2.19409231913646,6.23596833031671,3.02920529092937,7.64014158731085,6.30419621593366,2.4850671476163,2.61955455391865,1.52604533079439,0.386521706326594,0.818238361772504,0.286804595389004,2.19552671033272,0.795178609928912,1.16193942869518,0.414644220061482,1.51392510525377,0.72995471815166,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,1.77460200059766,0.842923450390509,0.723033089650446,0.55146986366197,1.30727666455444,0.949082476444386,0.269662616320329,0,0.769494313892781,0.738155454624648,7.01208869017229,1.2347220339942,0,1.26755034821831,16.7080626835196,2.95394953340702,0,0.983907508344908,2.05881372358231,0.439001141634502,15.7362454560667,1.3068766413512,1.75918045801206,42.3550796903422,3.11980435583874,2.88662684050547,0.34779121492523,4.69634776943287,1.44366447761074,2.77791307545966,2.28304982681518,0,0.858486162094873,0,0.234004265139238,0,0.93733833986777,1.00789276919316,0.425325291727159,5.82130397568514,5.23141089325132,0.766765358330422,0.492663237895943,1.93706554829097,0,0,0.25248486685276,0.063497894292169,3.81988425558278,1.17217447210047,3.4214489204541,0.514137463516618,2.10240140490742,4.28739648945867,4.48524337381443,3.48768055066624,2.4935017179123,2.84397774667111,17.8828222925941,1.690605505112,3.19125739901845,4.16029747645464,0.514414748524284,0,1.0656887160644,6.71996570193294,35.2704043504438,1.64648067356154,0.977208552881205,9.95097456479128,0,0,1.74306691720059,0.199945982364114,3.64871341923571,0.502257091432126,0,4.79249710983165,8.04033550838797,0,3.18518874668674,0.821905290201534,0.358121926479791,7.28553435957927,0.197030760201927,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,6.51036056879365,3.53550464602372,5.70972764150918,7.254311091561,7.84847480451178,8.12554469264841,13.6444502433591,15.5209606938757,1.99267679560631,2.21243002250044,1.99832313276591,2.54541504701563,1.71571711905428,0.206768026122887,0,0.106727557803444,1.81876542867756,6.65741758041988,5.44302527993425,6.94701861892575,4.910783145218,7.85848264412606,6.66323576129645,5.62877973973374,9.32952742632923,7.42090332224955,0.462629081407967,2.30830242907065,0.821271560138091,1.03850885836724,0.348631135379878,0.483437798366489,0.40101294060657,1.56537681191024,6.7740524417118,6.55528204824181,4.45823010862042,6.31679458070376,1.61732207919271,4.70609861506113,0,0,1.13733384070897,2.38131187387122,0.863663664408557,0,0.270946437543853,0,4.33289664176565,15.7904441696458,0.671624264166535,0.219259876645935,0,0.256450125116389,0,10.4121086292577,1.44257416306811,0.640986253728404,0.330037999682352,2.87132768998086,0,11.2478750890912,10.9237911670098,0.924291702687866,1.5350367472613,1.10269257987624,2.25582514223375,0.290033387828457,1.27839941124151,1.95870478422822,10.7435194984636,9.03293316615999,0.510450849978337,8.69956915357729,7.43752878875657,2.20368642781448,2.7881490806424,7.39280592422613,1.06461206063404,4.34966496037536,7.96894142146856,10.4481167321654,0.744316738719335,0,1.33441135746677,2.303080121802,11.9822916649498,5.09125196681499,13.3441268833869,0.359744915166629,1.64722217841633,1.64937363283961,2.62837226045311,7.92551605865041,1.68503382495592,4.8763373908959,7.06769119930725,13.7345190783782,3.68549760801562,4.3835683905651,1.13008116620243,3.85955740482287,11.941901554342,7.0152141640602,0.578775534266688,0,7.50768394762005,3.717881977197,4.50712964051586,2.72481569187698,8.3511684861153,7.49009208110625,2.48332744849418,6.12212142363226,6.91519275215794,4.55367808518858,19.596344333719,11.0655429634339,2.01090682660736,14.1558280319719,1.69458841398202,3.01353760869861,1.68471475667626,2.66058092122005,2.06751060186264,0.507447609232169,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,1.48642540100575,0,1.06712765022621,0,0.399158742865633,0.383010740264733,15.6638451215673,0.324621940274555,0,0,0.313359791546046,2.50634477090067,0.677167111206413,0.321176150207399,0.605399121573143,4.25846237690326,1.71752672377882,0.614481528616916,0.671028323677248,0.667396566847634,2.34465714482448,0.278406173895242,0,2.70455678475983,1.33228787199128,0,0.748562161632879,0.293016358543788,0,2.00598091699461,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.281338832821026,22.0391235945354,2.80166586185491,0,0.398495976502139,0,0,1.02268682502155,2.09244169283818,2.17727711363265,4.49341755736634,0.895105873378046,7.1620131831762,0.197286811273867,0,0,0,0.185536196323703,0,3.64598865519327,0.61221999997337,0,2.84483620713749,0,0.236387681767936,0.344743373241465,0,2.77799991893268,0,0.361789315876224,0,0,0,0,3.05027697853172,1.95193241990045,0,6.83652335082007,2.07507513949254,4.48788222048861,1.84700532267414,1.27600463892768,2.28993983504656,2.13213910407454,0,0.156980256395025,0.498635045700469,0.225595660617181,0,0,0.189753732724185,0.635746315921515,0.632994193584081,1.30586246527318,0.282706142867882,1.08194319871046,0,0.265372693510018,0,4.15129580152871,5.18968543575312,3.23708043466912,0.134802265961354,0,0.234264445725339,5.47364367646998,1.76098157038881,2.42780379534093,0,0,0,1.39010475182674,14.4310482637913,0.207376382794494,7.31119259977904,5.29587129400798,8.47618879699508,11.9472429772959,3.69992409838731,6.1016856125781,0.347119476670262,1.27390116638691,2.08942095792966,0,0.343972064943233,2.70917727609438,6.13950263523959,2.38134825454307,0.0969890164884194,1.76512253383001,0.451961481561065,3.01492234222852,1.19228767021794,0,0.586654148204409,0,0,4.79543062997113,5.61952626901013,0.229073192331831,1.54435498075768,3.16920555573929,2.36079817574322,3.29971648463514,0.407712618220842,0.627617077873999,1.32597682927218,2.60055530911367,0,1.09524303113594,0,1.28929632425987,2.10309883423452,0.558564802544508,0,3.58936512288407,0.199679000498991,0,0.669514372325618,0.0671834724867263,3.24269895188163,5.82479747637269,1.73323001075892,1.15382201733633,1.81989568406299,4.52766414967844,3.64095327882873,0,0.136203406111576,0.643012593860077,0.412618309791701,0,0,0,0,0,0.394028536495991,0.786818822024972,4.64641480685389,16.3151478792889,13.4340638123612,0,0,0,2.71499800876856,0,0.653174720218818,1.19730191562487,3.44788587147224,0.340776043570843,0.339936274560377,8.50002955332878,1.32506888912221,0.517131825446202,0.79339561045614,2.22412889249628,0,0.640724475406168,0,0.414239055347196,0.496166021811951,4.14984426985683,0.243585196761792,5.74507131993164,0,1.0027595760908,0,0.327872630709804,2.19875734750328,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.248385611765534,1.38348634936231,0.124980407962107,5.76266646658262,5.42384133735438,14.3512150015885,0,0.144921028610825,1.94031243752936,7.71253922495841,7.76728206103659,3.59865710022669,4.52822223154635,1.77962244319307,24.028207181677,4.38569678913393,3.57505561340395,1.92211694986524,1.91156120596443,23.3897618325074,2.32894435314389,0.829412415681711,3.45594228925393,3.65221543268214,1.50257608997218,1.14241563650639,0.813741466409323,2.72772988803839,9.3447184626965,10.6727764772054,4.77715066438339,0.400027764663154,2.74716564146234,6.39824028655246,5.04739592914604,0.385239660814607,0.214441591374926,17.225623269704,4.53411851024545,0.463044948647668,10.2789415892716,1.07453304648892,1.54400723580486,9.64849818146311,1.41351316756705,3.8582807654183,9.291834235919,2.04993214870357,1.72715170865599,4.25403938648335,0,0,0.132864840313363,0,13.1043939538565,0.491545817507439,5.4941152073243,0.19998739585493,2.3472180532711,7.40524412541507,1.70254786070051,1.84105950251841,7.55349341685,2.48830904013189,0.511577485214607,0.539124056983409,3.77438260454151,0.109209638192014,0,0,0.371807292777007,0,6.04208266241495,3.86422550506141,1.60114149657094,8.11154670488573,3.062454773532,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,0,4.90738592505128,0.471878893390961,2.75142897782519,6.12286030596793,5.33934933654034,13.807198521202,1.98916222116275,0.451261970095544,0.40341013740704,1.56302802246618,1.30953347240711,11.9553499782371,1.33070477595341,0.0675375846183947,0,0,0,0,5.48257766857182,0.496211178389294,0,12.1374306257616,0,0.336283722218824,0,0,0.266107110487916,3.3417856391176,3.25827217931095,0,0,2.83665218121524,0.778619813244484,0.078493092850514,0,3.36326595976547,0,0.215927591218621,1.43325506366115,0.142953088353313,0.158013611732727,0,1.91244099532837,8.81882501203278,3.10824246244555,0.17071847709395,0,0,17.2764721066625,23.1780460944909,0,1.60374807980835,3.72247662797184,0.955538938977433,3.69122924932715,2.84635677484205,0,0,0,0,0,0.701818390386317,0.795803100645473,0.356760272332706,6.32498059418176,0.109940516745429,15.3982100438007,0.0771741581079447,0,4.70317296361523,0,12.2551804492845,0.392616934229891,0,0,4.24817786719542,0.845855261818682,1.74036297528658,0.199882311849858,2.67830907908486,8.11658204946091,1.04313776695919,0,0.917458566809082,0.573358332605805,0,0,0,0,2.23197010900051,5.0839319149456,1.29787968637137,0.504665699340316,0.218531143927391,0.253397002022874,1.01988829741982,1.87052183685892,1.19463369395298,0.50141507858475,0,0.267964130156178,0,0.517164979309476,0.426467963801962,0.23806443146374,0,0.0620747142958579,7.06430734257865,0.381882949668989,0,0.217716747896961,0,0.471464371102113,0.717222053926764,0,1.54666210360852,6.51036809854064,1.9307228228694,17.6955648149976,2.34640942403454,0,0,1.99727032255654,0.201273793591026,2.24397944612263 | ||
|short_description=p4@SHMT2 | |short_description=p4@SHMT2 | ||
}} | }} |
Latest revision as of 13:38, 19 September 2015
Short description: | p4@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHMT2_5end |
Coexpression cluster: | C2221_Mesenchymal_Fibroblast_Keratocytes_Keratinocyte_Osteoblast_mesenchymal_Hepatocyte |
Association with transcript: | 9bp_to_ENST00000557302_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-12 | 76 |
embryonic cell | 3.78e-10 | 250 |
mesodermal cell | 5.54e-10 | 121 |
multi fate stem cell | 2.20e-07 | 427 |
somatic stem cell | 2.65e-07 | 433 |
epithelial cell | 2.84e-07 | 253 |
vascular associated smooth muscle cell | 3.11e-07 | 32 |
smooth muscle cell | 3.81e-07 | 43 |
smooth muscle myoblast | 3.81e-07 | 43 |
stem cell | 9.70e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.58e-11 | 83 |
vessel | 3.73e-11 | 68 |
epithelial tube | 1.23e-10 | 117 |
epithelial tube open at both ends | 1.23e-10 | 59 |
blood vessel | 1.23e-10 | 59 |
blood vasculature | 1.23e-10 | 59 |
vascular cord | 1.23e-10 | 59 |
artery | 1.62e-10 | 42 |
arterial blood vessel | 1.62e-10 | 42 |
arterial system | 1.62e-10 | 42 |
vasculature | 4.62e-10 | 78 |
vascular system | 4.62e-10 | 78 |
unilaminar epithelium | 1.42e-08 | 148 |
systemic artery | 2.83e-08 | 33 |
systemic arterial system | 2.83e-08 | 33 |
cardiovascular system | 7.75e-08 | 109 |
trunk | 2.94e-07 | 199 |
circulatory system | 4.70e-07 | 112 |