FFCP PHASE1:Hg19::chr14:24641209..24641246,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16879 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95072 | ||
|association_with_transcript=0bp_to_ENST00000557806,ENST00000559919,NM_001048205,NM_005132,uc001wmr.2,uc001wms.2_5end | |association_with_transcript=0bp_to_ENST00000557806,ENST00000559919,NM_001048205,NM_005132,uc001wmr.2,uc001wms.2_5end | ||
|cluster_id=chr14:24641209..24641246,+ | |cluster_id=chr14:24641209..24641246,+ |
Latest revision as of 13:40, 19 September 2015
Short description: | p2@REC8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REC8_5end |
Coexpression cluster: | C3416_Alveolar_Renal_Mesothelial_Retinal_mesothelioma_mesenchymal_Ciliary |
Association with transcript: | 0bp_to_ENST00000557806, ENST00000559919, NM_001048205, NM_005132, uc001wmr.2, uc001wms.2_5end |
EntrezGene: | REC8 |
HGNC: | 16879 |
UniProt: | O95072 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@REC8 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of nephron | 8.48e-15 | 15 |
kidney cell | 2.94e-12 | 17 |
kidney epithelial cell | 2.94e-12 | 17 |
kidney cortical cell | 4.23e-12 | 12 |
renal cortical epithelial cell | 4.23e-12 | 12 |
kidney tubule cell | 1.03e-10 | 10 |
nephron tubule epithelial cell | 1.03e-10 | 10 |
neural cell | 3.85e-08 | 25 |
glomerular cell | 1.26e-07 | 7 |
kidney corpuscule cell | 1.26e-07 | 7 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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neural plate | 4.27e-38 | 82 |
presumptive neural plate | 4.27e-38 | 82 |
neurectoderm | 3.36e-37 | 86 |
pre-chordal neural plate | 4.95e-32 | 61 |
central nervous system | 4.36e-30 | 81 |
nervous system | 5.44e-29 | 89 |
neural tube | 1.16e-28 | 56 |
neural rod | 1.16e-28 | 56 |
future spinal cord | 1.16e-28 | 56 |
neural keel | 1.16e-28 | 56 |
Showing 1 to 10 of 88 entries