FFCP PHASE1:Hg19::chr6:105624156..105624177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64208 | |EntrezGene=64208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17649 | |HGNC=17649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_NR_024539,uc003pra.2_5end | |||
|cluster_id=chr6:105624156..105624177,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_POPDC3_5end | |||
|id=chr6:105624156..105624177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10 | |||
|ontology_enrichment_disease=DOID:162!2.78e-07!235;DOID:14566!5.44e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002148!2.81e-08!2;UBERON:0009662!2.81e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.58e-23;10!UBERON:0000178;1.21e-15;15!UBERON:0000179;1.21e-15;15!UBERON:0000463;1.21e-15;15!UBERON:0000473;2.07e-13;8!UBERON:0000478;4.85e-10;24!UBERON:0003135;5.06e-10;11!UBERON:0002390;9.12e-08;32!UBERON:0003343;1.92e-07;4!UBERON:0004785;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.42e-23,10;UBERON:0000358,4.42e-23,10;UBERON:0000307,4.42e-23,10;UBERON:0000091,4.42e-23,10;UBERON:0000087,4.42e-23,10;UBERON:0007010,4.42e-23,10;UBERON:0007806,4.42e-23,10;UBERON:0008780,4.42e-23,10;UBERON:0005728,4.42e-23,10;UBERON:0000178,1.18e-15,15;UBERON:0000179,1.18e-15,15;UBERON:0000463,1.18e-15,15;UBERON:0000473,2.07e-13,8;UBERON:0000478,4.77e-10,24;UBERON:0003135,5.06e-10,11;UBERON:0003343,1.80e-07,4;UBERON:0004785,1.80e-07,4 | |||
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| ||
|short_description=p6@POPDC3 | |||
}} | }} |
Latest revision as of 14:09, 19 September 2015
Short description: | p6@POPDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_POPDC3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -26bp_to_NR_024539, uc003pra.2_5end |
EntrezGene: | POPDC3 |
HGNC: | 17649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.42e-23 | 10 |
blastocyst | 4.42e-23 | 10 |
blastula | 4.42e-23 | 10 |
bilaminar disc | 4.42e-23 | 10 |
inner cell mass | 4.42e-23 | 10 |
cleaving embryo | 4.42e-23 | 10 |
connecting stalk | 4.42e-23 | 10 |
inner cell mass derived epiblast | 4.42e-23 | 10 |
extraembryonic mesoderm | 4.42e-23 | 10 |
blood | 1.18e-15 | 15 |
haemolymphatic fluid | 1.18e-15 | 15 |
organism substance | 1.18e-15 | 15 |
testis | 2.07e-13 | 8 |
extraembryonic structure | 4.77e-10 | 24 |
male reproductive organ | 5.06e-10 | 11 |
mucosa of oral region | 1.80e-07 | 4 |
respiratory system mucosa | 1.80e-07 | 4 |