FFCP PHASE1:Hg19::chr17:33390667..33390762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |EntrezGene=117584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24821 | |HGNC=24821 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZ73 | |UniProt=Q8WZ73 | ||
|association_with_transcript=0bp_to_ENST00000268850,ENST00000378516,ENST00000394597,NM_001017368,uc002hin.1_5end | |association_with_transcript=0bp_to_ENST00000268850,ENST00000378516,ENST00000394597,NM_001017368,uc002hin.1_5end | ||
|cluster_id=chr17:33390667..33390762,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_RFFL_5end | |description=CAGE_peak_2_at_RFFL_5end | ||
|id=chr17:33390667..33390762,- | |id=chr17:33390667..33390762,- | ||
|ontology_enrichment_celltype=CL:0000766!7.08e-21!76;CL:0002194!2.11e-19!63;CL:0000576!2.11e-19!63;CL:0000040!2.11e-19!63;CL:0000559!2.11e-19!63;CL:0002009!4.15e-18!65;CL:0000839!4.65e-18!70;CL:0000860!1.03e-17!45;CL:0002057!3.44e-17!42;CL:0000557!5.74e-15!71;CL:0002087!1.43e-14!119;CL:0000738!1.72e-14!140;CL:0002031!3.29e-13!124;CL:0000763!3.54e-13!112;CL:0000049!3.54e-13!112;CL:0000037!7.21e-12!172;CL:0000566!7.21e-12!172;CL:0002032!1.65e-11!165;CL:0000837!1.65e-11!165;CL:0000988!2.15e-09!182 | |ontology_enrichment_celltype=CL:0000766!7.08e-21!76;CL:0002194!2.11e-19!63;CL:0000576!2.11e-19!63;CL:0000040!2.11e-19!63;CL:0000559!2.11e-19!63;CL:0002009!4.15e-18!65;CL:0000839!4.65e-18!70;CL:0000860!1.03e-17!45;CL:0002057!3.44e-17!42;CL:0000557!5.74e-15!71;CL:0002087!1.43e-14!119;CL:0000738!1.72e-14!140;CL:0002031!3.29e-13!124;CL:0000763!3.54e-13!112;CL:0000049!3.54e-13!112;CL:0000037!7.21e-12!172;CL:0000566!7.21e-12!172;CL:0002032!1.65e-11!165;CL:0000837!1.65e-11!165;CL:0000988!2.15e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.03e-18;33!CL:0002057;4.03e-18;33!CL:0000473;8.10e-17;39!CL:0000234;8.10e-17;39!CL:0000576;2.19e-12;48!CL:0000766;1.94e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.55e-21,72;CL:0002194,2.34e-20,59;CL:0000576,2.34e-20,59;CL:0000040,2.34e-20,59;CL:0000559,2.34e-20,59;CL:0000473,1.49e-19,48;CL:0000234,1.49e-19,48;CL:0002009,3.60e-19,61;CL:0000839,1.51e-18,66;CL:0000860,1.75e-17,42;CL:0002057,1.75e-17,42;CL:0000557,1.21e-15,67;CL:0002087,1.40e-14,115;CL:0000738,1.55e-14,136;CL:0000763,2.15e-13,108;CL:0000049,2.15e-13,108;CL:0002031,3.84e-13,120;CL:0000037,1.01e-11,168;CL:0002032,2.40e-11,161;CL:0000837,2.40e-11,161;CL:0000988,1.69e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.01e-19!102;UBERON:0003061!5.01e-19!102;UBERON:0002193!2.88e-18!112;UBERON:0002405!9.88e-18!115;UBERON:0007023!3.03e-17!115;UBERON:0002371!4.58e-14!80;UBERON:0001474!3.43e-12!86;UBERON:0004765!2.46e-10!101;UBERON:0001434!2.46e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-20,98;UBERON:0003061,2.75e-20,98;UBERON:0002193,1.94e-19,108;UBERON:0007023,2.20e-16,114;UBERON:0002405,8.28e-16,93;UBERON:0002371,1.23e-14,76;UBERON:0001474,1.82e-12,82;UBERON:0004765,4.14e-12,90;UBERON:0001434,4.84e-10,100 | |||
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| ||
|short_description=p2@RFFL | |short_description=p2@RFFL | ||
}} | }} |
Latest revision as of 14:11, 19 September 2015
Short description: | p2@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFFL_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000268850, ENST00000378516, ENST00000394597, NM_001017368, uc002hin.1_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | Q8WZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.55e-21 | 72 |
monopoietic cell | 2.34e-20 | 59 |
monocyte | 2.34e-20 | 59 |
monoblast | 2.34e-20 | 59 |
promonocyte | 2.34e-20 | 59 |
defensive cell | 1.49e-19 | 48 |
phagocyte | 1.49e-19 | 48 |
macrophage dendritic cell progenitor | 3.60e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-18 | 66 |
classical monocyte | 1.75e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-17 | 42 |
granulocyte monocyte progenitor cell | 1.21e-15 | 67 |
nongranular leukocyte | 1.40e-14 | 115 |
leukocyte | 1.55e-14 | 136 |
myeloid cell | 2.15e-13 | 108 |
common myeloid progenitor | 2.15e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 3.84e-13 | 120 |
hematopoietic stem cell | 1.01e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.40e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-11 | 161 |
hematopoietic cell | 1.69e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-20 | 98 |
blood island | 2.75e-20 | 98 |
hemolymphoid system | 1.94e-19 | 108 |
adult organism | 2.20e-16 | 114 |
immune system | 8.28e-16 | 93 |
bone marrow | 1.23e-14 | 76 |
bone element | 1.82e-12 | 82 |
skeletal element | 4.14e-12 | 90 |
skeletal system | 4.84e-10 | 100 |