FFCP PHASE1:Hg19::chr18:44526786..44526811,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83473 | |EntrezGene=83473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25387 | |HGNC=25387 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYT4,F8WBL0 | |UniProt=Q8IYT4,F8WBL0 | ||
|association_with_transcript=0bp_to_ENST00000245121,ENST00000356157,ENST00000454462,NM_031303,uc002lco.2_5end | |association_with_transcript=0bp_to_ENST00000245121,ENST00000356157,ENST00000454462,NM_031303,uc002lco.2_5end | ||
|cluster_id=chr18:44526786..44526811,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_4_at_KATNAL2_5end | |description=CAGE_peak_4_at_KATNAL2_5end | ||
|id=chr18:44526786..44526811,+ | |id=chr18:44526786..44526811,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.31e-07!5 | |ontology_enrichment_celltype=CL:0002322!7.31e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.59e-25;5!CL:0002321;4.04e-11;15!CL:0000540;4.76e-08;6!CL:0000404;4.76e-08;6!CL:0000075;1.73e-07;27!CL:0000064;8.28e-07;3!CL:0000067;8.28e-07;3!CL:0005012;8.28e-07;3!CL:0002304;8.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.64e-25,5;CL:0000540,4.71e-08,6;CL:0000031,4.71e-08,6;CL:0000404,4.71e-08,6;CL:0000075,1.66e-07,27;CL:0000064,7.81e-07,3;CL:0000067,7.81e-07,3;CL:0005012,7.81e-07,3;CL:0002304,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.76e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.03e-10;4!DOID:1612;1.03e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.63e-10,4;DOID:1612,1.63e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0002346!6.32e-14!90;UBERON:0003075!7.10e-13!86;UBERON:0007284!7.10e-13!86;UBERON:0000924!3.12e-10!173;UBERON:0006601!3.12e-10!173;UBERON:0003056!5.13e-10!61;UBERON:0000073!1.67e-09!94;UBERON:0001016!1.67e-09!94;UBERON:0004121!2.06e-09!169;UBERON:0005743!2.63e-09!86;UBERON:0000153!5.64e-09!129;UBERON:0007811!5.64e-09!129;UBERON:0001456!7.04e-09!21;UBERON:0000019!7.32e-09!19;UBERON:0000047!7.32e-09!19;UBERON:0004088!7.32e-09!19;UBERON:0003072!7.32e-09!19;UBERON:0003071!7.32e-09!19;UBERON:0004128!7.32e-09!19;UBERON:0000033!1.49e-08!123;UBERON:0000970!3.61e-08!20;UBERON:0007023!4.71e-08!115;UBERON:0007625!7.16e-08!11;UBERON:0001017!8.02e-08!82;UBERON:0001049!1.42e-07!57;UBERON:0005068!1.42e-07!57;UBERON:0006241!1.42e-07!57;UBERON:0007135!1.42e-07!57;UBERON:0002104!1.51e-07!21;UBERON:0002616!4.93e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.28e-07;3!UBERON:0001778;8.28e-07;3!UBERON:0001775;8.28e-07;3!UBERON:0005290;8.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,7.81e-07,3;UBERON:0001775,7.81e-07,3;UBERON:0001896,8.54e-07,3;UBERON:0005290,8.54e-07,3;UBERON:0010096,8.54e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,1.13441780596881,1.99556457716308,0.87834785693126,1.30979075497713,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.714397826272638,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0.969876340912871,0,0.10075209822764,0,0.193260853163297,0,0,9.14802795971965,9.67467308746842,6.9716365721711,6.3233243559376,8.07426722802011,5.47466038613745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.100528972411631,0.370353780634118,0,0,0,1.97081688457631,0.234817388471643,0,0,0,0.790204397959275,2.57545848628462,0,0,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.462092022626489,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0.580024309752732,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.356128142586949,0,0.576570202095319,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,1.70481688083848,0,3.56357616999166,0.307160702099232,0,0.562677665642051,0,0,0.63337622438398,0.996239941255349,0,6.55025144421118,1.73856760253663,0,0,1.97710372524119,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,1.04171104434093,1.22443999994674,0,0,0,0,0,0,1.38899995946634,0,0.482385754501632,1.52581736317083,0.331737779793674,0,0.438770794307945,0,0,0.153900517007594,0,0,0,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0.189559738885464,0.60129367765797,0.207376382794494,0,0,0,0,0,0,1.73559738335131,0,0,0.698906672968121,0.51595809741485,0,0,0,0,0,0,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,6.59087908706579,14.3041014061123,10.3860084507296,0,0,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0.542999601753713,0,0,1.19730191562487,0.328370082997356,0,0,0,0,0.387848869084652,0.52893040697076,0,4.22889013390003,0.854299300541557,3.14408610199332,2.48543433208317,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,1.72022758707021,1.22021956690538,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0.298509605773748,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,2.32815493405934,0.308801447160972,0,0.530067437837643,0,0.168942440653073,0,0,0,0.138258436151731,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,3.40509572140102,0.184105950251841,0,0,0.511577485214607,0.646948868380091,0.314531883711793,0,0.33946505990805,0,0.247871528518004,0,0,0.94634094001504,0,0.705351887381368,0,0.192687675289379,0,0.319267718114302,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.620060389503552,0,0.546974809018219,0,0,0.703484977438482,0,0,0,0,0.455324382702595,0,0,0,0.40781839786099,0.0657727735628491,0.354581522651905,0,0.078493092850514,0.471346769748006,0,0,0,0,0.285906176706625,4.58239474024907,0.23248285073625,0.52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| ||
|short_description=p4@KATNAL2 | |short_description=p4@KATNAL2 | ||
}} | }} |
Latest revision as of 15:43, 19 September 2015
Short description: | p4@KATNAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KATNAL2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000245121, ENST00000356157, ENST00000454462, NM_031303, uc002lco.2_5end |
EntrezGene: | KATNAL2 |
HGNC: | 25387 |
UniProt: | Q8IYT4F8WBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.64e-25 | 5 |
neuron | 4.71e-08 | 6 |
neuroblast | 4.71e-08 | 6 |
electrically signaling cell | 4.71e-08 | 6 |
columnar/cuboidal epithelial cell | 1.66e-07 | 27 |
ciliated cell | 7.81e-07 | 3 |
ciliated epithelial cell | 7.81e-07 | 3 |
multi-ciliated epithelial cell | 7.81e-07 | 3 |
non-pigmented ciliary epithelial cell | 7.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 7.81e-07 | 3 |
ciliary body | 7.81e-07 | 3 |
medulla oblongata | 8.54e-07 | 3 |
myelencephalon | 8.54e-07 | 3 |
future myelencephalon | 8.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.63e-10 | 4 |
breast cancer | 1.63e-10 | 4 |