FFCP PHASE1:Hg19::chr1:199996702..199996732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2494 | |EntrezGene=2494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7984 | |HGNC=7984 | ||
|TSSclassifier=strong | |||
|UniProt=O00482 | |UniProt=O00482 | ||
|association_with_transcript=0bp_to_ENST00000367362_5end | |association_with_transcript=0bp_to_ENST00000367362_5end | ||
|cluster_id=chr1:199996702..199996732,+ | |||
|coexpression_cluster_id=C1825 | |||
|description=CAGE_peak_5_at_NR5A2_5end | |description=CAGE_peak_5_at_NR5A2_5end | ||
|id=chr1:199996702..199996732,+ | |id=chr1:199996702..199996732,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.78e-12!12;CL:0000417!1.78e-12!12;CL:0000668!1.78e-12!12;CL:0000414!1.78e-12!12;CL:0000412!1.78e-12!12;CL:0000182!1.78e-12!12;CL:0000223!8.45e-11!59;CL:0000083!9.25e-10!4;CL:0002097!8.70e-09!2 | |ontology_enrichment_celltype=CL:0000181!1.78e-12!12;CL:0000417!1.78e-12!12;CL:0000668!1.78e-12!12;CL:0000414!1.78e-12!12;CL:0000412!1.78e-12!12;CL:0000182!1.78e-12!12;CL:0000223!8.45e-11!59;CL:0000083!9.25e-10!4;CL:0002097!8.70e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.44e-13;12!CL:0002563;3.29e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-13,12;CL:0002563,3.29e-10,4;CL:0000223,2.20e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.18e-14;11!UBERON:0003104;4.74e-14;31!UBERON:0009497;4.53e-12;13!UBERON:0006242;1.54e-10;1 | |||
|ontology_enrichment_disease=DOID:170!1.46e-16!6;DOID:305!1.30e-10!106;DOID:1793!9.25e-10!4;DOID:4929!2.05e-09!2;DOID:3493!2.87e-09!2;DOID:4074!7.11e-09!2;DOID:4905!7.11e-09!2;DOID:3498!7.11e-09!2;DOID:0050687!1.47e-08!143;DOID:299!3.50e-07!25;DOID:3119!3.92e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.87e-24!23;UBERON:0005409!1.19e-22!35;UBERON:0000160!1.53e-22!27;UBERON:0009497!3.52e-22!25;UBERON:0000015!3.52e-22!25;UBERON:0002423!3.52e-22!25;UBERON:0006235!3.52e-22!25;UBERON:0004161!3.52e-22!25;UBERON:0008835!2.12e-21!22;UBERON:0003894!2.12e-21!22;UBERON:0009856!3.69e-21!26;UBERON:0004921!1.02e-18!129;UBERON:0004185!1.02e-18!129;UBERON:0007499!1.50e-18!25;UBERON:0000949!1.10e-17!45;UBERON:0002107!5.73e-17!19;UBERON:0006925!5.73e-17!19;UBERON:0008836!5.73e-17!19;UBERON:0003929!2.31e-16!54;UBERON:0001007!7.84e-16!155;UBERON:0001555!7.84e-16!155;UBERON:0007026!7.84e-16!155;UBERON:0004119!5.76e-14!169;UBERON:0000925!5.76e-14!169;UBERON:0006595!5.76e-14!169;UBERON:0002108!7.41e-13!14;UBERON:0000077!7.93e-13!130;UBERON:0002368!1.76e-12!35;UBERON:0005172!4.77e-12!55;UBERON:0005173!4.77e-12!55;UBERON:0005057!6.09e-12!26;UBERON:0002114!4.20e-11!12;UBERON:0005911!5.64e-11!82;UBERON:0002417!1.48e-10!61;UBERON:0000916!1.48e-10!61;UBERON:0005177!8.32e-10!107;UBERON:0002365!9.57e-10!31;UBERON:0002330!9.57e-10!31;UBERON:0001041!1.01e-09!98;UBERON:0000059!2.15e-09!11;UBERON:0001045!2.67e-09!11;UBERON:0002530!3.19e-09!59;UBERON:0004907!3.98e-08!5;UBERON:0001155!1.11e-07!9;UBERON:0003104!3.07e-07!238;UBERON:0009142!3.07e-07!238;UBERON:0001264!7.72e-07!10;UBERON:0003922!7.72e-07!10;UBERON:0003923!7.72e-07!10;UBERON:0003924!7.72e-07!10;UBERON:0003921!7.72e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.42e-18;25!UBERON:0002107;3.48e-18;19!UBERON:0006925;3.48e-18;19!UBERON:0000160;8.38e-13;17!UBERON:0002365;4.95e-11;31!UBERON:0002330;4.95e-11;31!UBERON:0001242;3.29e-10;4!UBERON:0001262;3.29e-10;4!UBERON:0004786;3.29e-10;4!UBERON:0004808;3.29e-10;4!UBERON:0001277;3.29e-10;4!UBERON:0005409;5.35e-10;22!UBERON:0002368;1.88e-09;33!UBERON:0000949;2.22e-09;43!UBERON:0005172;2.97e-09;52!UBERON:0005173;2.97e-09;52!UBERON:0002108;1.93e-08;4!UBERON:0001007;2.33e-08;81!UBERON:0002417;5.92e-07;58!UBERON:0000916;5.92e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.30e-18,25;UBERON:0000015,2.30e-18,25;UBERON:0002423,2.30e-18,25;UBERON:0006235,2.30e-18,25;UBERON:0004161,2.30e-18,25;UBERON:0002107,3.43e-18,19;UBERON:0006925,3.43e-18,19;UBERON:0008836,3.43e-18,19;UBERON:0008835,1.18e-15,22;UBERON:0003894,1.18e-15,22;UBERON:0009854,5.87e-15,23;UBERON:0007499,9.98e-14,25;UBERON:0005172,2.95e-13,54;UBERON:0005173,2.95e-13,54;UBERON:0003929,3.44e-13,54;UBERON:0009856,3.50e-13,26;UBERON:0000949,7.20e-13,45;UBERON:0000160,8.70e-13,17;UBERON:0005177,7.82e-12,101;UBERON:0002417,8.31e-12,60;UBERON:0000916,8.31e-12,60;UBERON:0002365,5.51e-11,31;UBERON:0002330,5.51e-11,31;UBERON:0005911,2.94e-10,82;UBERON:0001242,3.29e-10,4;UBERON:0001262,3.29e-10,4;UBERON:0004786,3.29e-10,4;UBERON:0004808,3.29e-10,4;UBERON:0001277,3.29e-10,4;UBERON:0002368,1.12e-09,35;UBERON:0004921,1.14e-09,118;UBERON:0001007,6.00e-09,145;UBERON:0001555,6.00e-09,145;UBERON:0007026,6.00e-09,145;UBERON:0005409,8.08e-09,25;UBERON:0002108,2.00e-08,4;UBERON:0004119,6.45e-08,160;UBERON:0000925,6.45e-08,160;UBERON:0006595,6.45e-08,160;UBERON:0009569,3.82e-07,112 | |||
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| ||
|short_description=p5@NR5A2 | |short_description=p5@NR5A2 | ||
}} | }} |
Latest revision as of 15:43, 19 September 2015
Short description: | p5@NR5A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR5A2_5end |
Coexpression cluster: | C1825_pancreas_Hepatocyte_liver_colon_gastric_hepatoma_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000367362_5end |
EntrezGene: | NR5A2 |
HGNC: | 7984 |
UniProt: | O00482 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-13 | 12 |
intestinal epithelial cell | 3.29e-10 | 4 |
endodermal cell | 2.20e-07 | 58 |