FFCP PHASE1:Hg19::chr1:89357240..89357257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2959 | |EntrezGene=2959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4648 | |HGNC=4648 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=B1APE2 | |UniProt=B1APE2 | ||
|association_with_transcript=14bp_to_ENST00000418217_5end | |association_with_transcript=14bp_to_ENST00000418217_5end | ||
|cluster_id=chr1:89357240..89357257,- | |||
|coexpression_cluster_id=C4003 | |coexpression_cluster_id=C4003 | ||
|description=CAGE_peak_1_at_GTF2B_5end | |description=CAGE_peak_1_at_GTF2B_5end |
Latest revision as of 16:00, 19 September 2015
Short description: | p1@GTF2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF2B_5end |
Coexpression cluster: | C4003_CD14_CD4_immature_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 14bp_to_ENST00000418217_5end |
EntrezGene: | GTF2B |
HGNC: | 4648 |
UniProt: | B1APE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GTF2B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.52e-59 | 168 |
leukocyte | 9.38e-56 | 136 |
hematopoietic oligopotent progenitor cell | 6.15e-55 | 161 |
hematopoietic multipotent progenitor cell | 6.15e-55 | 161 |
hematopoietic cell | 1.89e-54 | 177 |
hematopoietic lineage restricted progenitor cell | 8.62e-50 | 120 |
nongranular leukocyte | 5.88e-47 | 115 |
myeloid cell | 1.37e-33 | 108 |
common myeloid progenitor | 1.37e-33 | 108 |
myeloid leukocyte | 1.85e-32 | 72 |
Showing 1 to 10 of 40 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.63e-33 | 98 |
blood island | 4.63e-33 | 98 |
hemolymphoid system | 4.35e-27 | 108 |
bone element | 1.59e-25 | 82 |
bone marrow | 1.63e-25 | 76 |
skeletal element | 1.63e-23 | 90 |
immune system | 7.79e-21 | 93 |
skeletal system | 7.19e-19 | 100 |
connective tissue | 1.26e-18 | 371 |
blood | 1.63e-07 | 15 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.68e-07 | 51 |
immune system cancer | 9.68e-07 | 51 |
Showing 1 to 2 of 2 entries