FFCP PHASE1:Hg19::chr17:34416924..34416935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6348 | |EntrezGene=6348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10627 | |HGNC=10627 | ||
|TSSclassifier=strong | |||
|UniProt=P10147 | |UniProt=P10147 | ||
|association_with_transcript=-281bp_to_AF043339_5end | |association_with_transcript=-281bp_to_AF043339_5end | ||
|cluster_id=chr17:34416924..34416935,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_CCL3_5end | |description=CAGE_peak_4_at_CCL3_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.78e-82!42;CL:0000860!3.06e-76!45;CL:0002194!9.43e-60!63;CL:0000576!9.43e-60!63;CL:0000040!9.43e-60!63;CL:0000559!9.43e-60!63;CL:0002009!9.82e-58!65;CL:0000766!1.10e-55!76;CL:0000839!3.46e-53!70;CL:0000557!2.36e-52!71;CL:0002087!1.41e-45!119;CL:0000738!1.83e-42!140;CL:0000988!7.99e-37!182;CL:0002031!5.28e-36!124;CL:0000763!1.14e-35!112;CL:0000049!1.14e-35!112;CL:0000037!3.78e-33!172;CL:0000566!3.78e-33!172;CL:0002032!7.75e-31!165;CL:0000837!7.75e-31!165;CL:0000080!1.87e-18!6;CL:0002393!1.59e-12!9;CL:0002397!1.59e-12!9;CL:0000134!8.29e-12!358;CL:0002320!2.00e-11!365;CL:0000219!4.42e-10!390;CL:0000048!1.80e-08!430;CL:0000723!3.05e-08!436;CL:0000034!6.03e-08!444;CL:0000842!6.72e-07!3;CL:0000623!9.07e-07!3;CL:0000825!9.07e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.78e-82!42;CL:0000860!3.06e-76!45;CL:0002194!9.43e-60!63;CL:0000576!9.43e-60!63;CL:0000040!9.43e-60!63;CL:0000559!9.43e-60!63;CL:0002009!9.82e-58!65;CL:0000766!1.10e-55!76;CL:0000839!3.46e-53!70;CL:0000557!2.36e-52!71;CL:0002087!1.41e-45!119;CL:0000738!1.83e-42!140;CL:0000988!7.99e-37!182;CL:0002031!5.28e-36!124;CL:0000763!1.14e-35!112;CL:0000049!1.14e-35!112;CL:0000037!3.78e-33!172;CL:0000566!3.78e-33!172;CL:0002032!7.75e-31!165;CL:0000837!7.75e-31!165;CL:0000080!1.87e-18!6;CL:0002393!1.59e-12!9;CL:0002397!1.59e-12!9;CL:0000134!8.29e-12!358;CL:0002320!2.00e-11!365;CL:0000219!4.42e-10!390;CL:0000048!1.80e-08!430;CL:0000723!3.05e-08!436;CL:0000034!6.03e-08!444;CL:0000842!6.72e-07!3;CL:0000623!9.07e-07!3;CL:0000825!9.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.37e-78;33!CL:0002057;7.37e-78;33!CL:0000473;8.01e-60;39!CL:0000234;8.01e-60;39!CL:0000576;2.35e-38;48!CL:0000766;5.56e-28;69!CL:0002087;3.87e-16;104!CL:0000763;2.70e-14;100!CL:0002393;2.05e-07;6!CL:0002397;2.05e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;7.37e-78;33!CL:0002057;7.37e-78;33!CL:0000473;8.01e-60;39!CL:0000234;8.01e-60;39!CL:0000576;2.35e-38;48!CL:0000766;5.56e-28;69!CL:0002087;3.87e-16;104!CL:0000763;2.70e-14;100!CL:0002393;2.05e-07;6!CL:0002397;2.05e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.89e-83,42;CL:0002057,6.89e-83,42;CL:0000473,3.89e-80,48;CL:0000234,3.89e-80,48;CL:0002194,1.19e-63,59;CL:0000576,1.19e-63,59;CL:0000040,1.19e-63,59;CL:0000559,1.19e-63,59;CL:0002009,1.60e-61,61;CL:0000839,9.30e-57,66;CL:0000557,6.88e-56,67;CL:0000766,6.72e-52,72;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0002087,9.26e-32,115;CL:0002031,2.41e-30,120;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.73e-57;42!CL:0000049;3.70e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.73e-57;42!CL:0000049;3.70e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-48!102;UBERON:0003061!2.31e-48!102;UBERON:0002371!8.92e-46!80;UBERON:0002193!2.03e-43!112;UBERON:0001474!3.80e-42!86;UBERON:0004765!6.11e-35!101;UBERON:0001434!6.11e-35!101;UBERON:0002405!6.77e-30!115;UBERON:0003081!5.52e-19!216;UBERON:0002204!1.60e-18!167;UBERON:0002384!6.62e-11!375;UBERON:0000178!3.05e-07!15;UBERON:0000179!3.05e-07!15;UBERON:0000463!3.05e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.31e-48!102;UBERON:0003061!2.31e-48!102;UBERON:0002371!8.92e-46!80;UBERON:0002193!2.03e-43!112;UBERON:0001474!3.80e-42!86;UBERON:0004765!6.11e-35!101;UBERON:0001434!6.11e-35!101;UBERON:0002405!6.77e-30!115;UBERON:0003081!5.52e-19!216;UBERON:0002204!1.60e-18!167;UBERON:0002384!6.62e-11!375;UBERON:0000178!3.05e-07!15;UBERON:0000179!3.05e-07!15;UBERON:0000463!3.05e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-49,76;UBERON:0001474,2.33e-45,82;UBERON:0004765,3.69e-41,90;UBERON:0002405,9.07e-40,93;UBERON:0002390,1.23e-37,98;UBERON:0003061,1.23e-37,98;UBERON:0001434,7.64e-37,100;UBERON:0002193,5.86e-34,108;UBERON:0002204,3.84e-21,167;UBERON:0003081,6.02e-17,203;UBERON:0000926,5.77e-10,315;UBERON:0004120,5.77e-10,315;UBERON:0006603,5.77e-10,315;UBERON:0002384,4.95e-08,371 | |||
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|short_description=p4@CCL3 | |short_description=p4@CCL3 | ||
}} | }} |
Latest revision as of 16:37, 19 September 2015
Short description: | p4@CCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCL3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -281bp_to_AF043339_5end |
EntrezGene: | CCL3 |
HGNC: | 10627 |
UniProt: | P10147 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.89e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.89e-83 | 42 |
defensive cell | 3.89e-80 | 48 |
phagocyte | 3.89e-80 | 48 |
monopoietic cell | 1.19e-63 | 59 |
monocyte | 1.19e-63 | 59 |
monoblast | 1.19e-63 | 59 |
promonocyte | 1.19e-63 | 59 |
macrophage dendritic cell progenitor | 1.60e-61 | 61 |
myeloid lineage restricted progenitor cell | 9.30e-57 | 66 |
granulocyte monocyte progenitor cell | 6.88e-56 | 67 |
myeloid leukocyte | 6.72e-52 | 72 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
nongranular leukocyte | 9.26e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-30 | 120 |
leukocyte | 1.66e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-49 | 76 |
bone element | 2.33e-45 | 82 |
skeletal element | 3.69e-41 | 90 |
immune system | 9.07e-40 | 93 |
hematopoietic system | 1.23e-37 | 98 |
blood island | 1.23e-37 | 98 |
skeletal system | 7.64e-37 | 100 |
hemolymphoid system | 5.86e-34 | 108 |
musculoskeletal system | 3.84e-21 | 167 |
lateral plate mesoderm | 6.02e-17 | 203 |
mesoderm | 5.77e-10 | 315 |
mesoderm-derived structure | 5.77e-10 | 315 |
presumptive mesoderm | 5.77e-10 | 315 |
connective tissue | 4.95e-08 | 371 |