FFCP PHASE1:Hg19::chr11:66886717..66886762,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:66886717..66886762,+
|short_description=p1@KDM2A
|description=CAGE_peak_1_at_KDM2A_5end
|association_with_transcript=0bp_to_ENST00000398645,NM_012308,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22992 | |EntrezGene=22992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |HGNC=13606 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2K7 | |UniProt=Q9Y2K7 | ||
|association_with_transcript=0bp_to_ENST00000398645,NM_012308,NR_027473,uc001ojw.2,uc001ojx.2_5end | |||
|cluster_id=chr11:66886717..66886762,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_KDM2A_5end | |||
|id=chr11:66886717..66886762,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.72e-33!140;CL:0000766!9.04e-29!76;CL:0002031!6.72e-26!124;CL:0000557!2.19e-25!71;CL:0002087!3.57e-25!119;CL:0002009!4.45e-25!65;CL:0002057!5.54e-25!42;CL:0000860!7.10e-25!45;CL:0000037!1.53e-24!172;CL:0000566!1.53e-24!172;CL:0002194!5.71e-24!63;CL:0000576!5.71e-24!63;CL:0000040!5.71e-24!63;CL:0000559!5.71e-24!63;CL:0000839!6.36e-24!70;CL:0002032!1.93e-22!165;CL:0000837!1.93e-22!165;CL:0000988!1.34e-21!182;CL:0000763!1.32e-19!112;CL:0000049!1.32e-19!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-18;33!CL:0002057;1.45e-18;33!CL:0000576;7.72e-17;48!CL:0000473;2.23e-14;39!CL:0000234;2.23e-14;39!CL:0000766;1.46e-12;69!CL:0002087;2.07e-08;104!CL:0000738;4.30e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.09e-33,136;CL:0000766,2.31e-28,72;CL:0002031,2.95e-25,120;CL:0000860,5.54e-25,42;CL:0002057,5.54e-25,42;CL:0000557,5.79e-25,67;CL:0002009,1.05e-24,61;CL:0002087,1.53e-24,115;CL:0000037,7.62e-24,168;CL:0002194,1.35e-23,59;CL:0000576,1.35e-23,59;CL:0000040,1.35e-23,59;CL:0000559,1.35e-23,59;CL:0000839,1.75e-23,66;CL:0000473,4.34e-23,48;CL:0000234,4.34e-23,48;CL:0002032,9.22e-22,161;CL:0000837,9.22e-22,161;CL:0000988,1.73e-21,177;CL:0000763,5.49e-19,108;CL:0000049,5.49e-19,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-26!102;UBERON:0003061!1.24e-26!102;UBERON:0002193!2.92e-25!112;UBERON:0002371!8.09e-21!80;UBERON:0001474!1.66e-19!86;UBERON:0002405!3.85e-16!115;UBERON:0004765!6.10e-13!101;UBERON:0001434!6.10e-13!101;UBERON:0007023!2.30e-12!115;UBERON:0003081!8.39e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.74e-26,98;UBERON:0003061,4.74e-26,98;UBERON:0002193,1.21e-24,108;UBERON:0002405,1.11e-20,93;UBERON:0002371,2.79e-20,76;UBERON:0001474,6.14e-19,82;UBERON:0004765,9.15e-15,90;UBERON:0007023,4.84e-12,114;UBERON:0001434,1.01e-11,100;UBERON:0003081,1.63e-08,203 | |||
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| ||
|short_description=p1@KDM2A | |||
}} | }} |
Latest revision as of 16:44, 19 September 2015
Short description: | p1@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM2A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000398645, NM_012308, NR_027473, uc001ojw.2, uc001ojx.2_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | Q9Y2K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.09e-33 | 136 |
myeloid leukocyte | 2.31e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 2.95e-25 | 120 |
classical monocyte | 5.54e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.54e-25 | 42 |
granulocyte monocyte progenitor cell | 5.79e-25 | 67 |
macrophage dendritic cell progenitor | 1.05e-24 | 61 |
nongranular leukocyte | 1.53e-24 | 115 |
hematopoietic stem cell | 7.62e-24 | 168 |
monopoietic cell | 1.35e-23 | 59 |
monocyte | 1.35e-23 | 59 |
monoblast | 1.35e-23 | 59 |
promonocyte | 1.35e-23 | 59 |
myeloid lineage restricted progenitor cell | 1.75e-23 | 66 |
defensive cell | 4.34e-23 | 48 |
phagocyte | 4.34e-23 | 48 |
hematopoietic oligopotent progenitor cell | 9.22e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.22e-22 | 161 |
hematopoietic cell | 1.73e-21 | 177 |
myeloid cell | 5.49e-19 | 108 |
common myeloid progenitor | 5.49e-19 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.74e-26 | 98 |
blood island | 4.74e-26 | 98 |
hemolymphoid system | 1.21e-24 | 108 |
immune system | 1.11e-20 | 93 |
bone marrow | 2.79e-20 | 76 |
bone element | 6.14e-19 | 82 |
skeletal element | 9.15e-15 | 90 |
adult organism | 4.84e-12 | 114 |
skeletal system | 1.01e-11 | 100 |
lateral plate mesoderm | 1.63e-08 | 203 |