FFCP PHASE1:Hg19::chr7:80548457..80548482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000487621_5end | |association_with_transcript=15bp_to_ENST00000487621_5end | ||
|cluster_id=chr7:80548457..80548482,- | |||
|coexpression_cluster_id=C958 | |||
|description=CAGE_peak_5_at_SEMA3C_5end | |description=CAGE_peak_5_at_SEMA3C_5end | ||
|id=chr7:80548457..80548482,- | |id=chr7:80548457..80548482,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.08e-13!659;UBERON:0000467!1.29e-10!625;UBERON:0000480!2.36e-10!626;UBERON:0002050!1.97e-09!605;UBERON:0005423!1.97e-09!605;UBERON:0000923!3.94e-09!604;UBERON:0005291!3.94e-09!604;UBERON:0006598!3.94e-09!604;UBERON:0002532!3.94e-09!604;UBERON:0000922!6.31e-09!612;UBERON:0000062!1.47e-08!511;UBERON:0000475!3.62e-07!365 | |ontology_enrichment_uberon=UBERON:0000468!6.08e-13!659;UBERON:0000467!1.29e-10!625;UBERON:0000480!2.36e-10!626;UBERON:0002050!1.97e-09!605;UBERON:0005423!1.97e-09!605;UBERON:0000923!3.94e-09!604;UBERON:0005291!3.94e-09!604;UBERON:0006598!3.94e-09!604;UBERON:0002532!3.94e-09!604;UBERON:0000922!6.31e-09!612;UBERON:0000062!1.47e-08!511;UBERON:0000475!3.62e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.18e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,3.16e-08,564;UBERON:0005423,1.84e-07,581;UBERON:0000923,3.22e-07,560;UBERON:0010316,3.22e-07,560;UBERON:0005291,3.22e-07,560;UBERON:0006598,3.22e-07,560;UBERON:0010317,3.22e-07,560;UBERON:0002532,3.22e-07,560;UBERON:0000922,8.20e-07,592 | |||
|phase1_expression=14.1709135831034,11.3473277662221,20.7202974021078,5.00366491765652,6.25745532198203,6.10636966870258,2.53299878168311,1.89515962028049,2.87304191019822,2.45733936501509,0,3.27662058195258,2.90143676051299,1.8564952944007,1.65698687863958,1.34465029290355,1.20538905604795,3.65155045193687,1.95173119516203,1.35433163884467,3.67201244239655,3.44800193625897,0.572471974262113,2.05311637609326,1.00434111675842,0,0,0,0.393364276848904,1.15148819429164,2.32224184974114,4.59710612239464,13.8554722637995,4.80680213216824,0,0,1.17440175733939,8.30993112797816,6.61796676651468,5.859293509328,1.34349284543955,2.26725566213286,1.28787783817093,2.03557534291391,1.13362783106643,1.4555043671269,3.25400651667958,4.11167888021826,4.64559556342655,2.3015391385772,1.5369642391746,2.60130452877444,8.96338769915208,8.39130088658974,5.41705946377367,1.88242339542605,3.0019676506363,2.02251136000576,7.65209730927256,8.34415470397843,5.75403413219137,1.64925650093358,1.19678194572979,0,14.5104619314292,9.07816359505824,9.9651559839292,2.51248665256743,1.5644487552606,1.3031330682307,8.47559303686716,10.3117738076518,7.27863491114034,1.05627643155971,0.850417199860174,0.419317291016752,2.92054440980887,1.05123824989054,1.76798145366788,0.570025487482497,0.19891667719909,1.27864907635244,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,5.60508562981536,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,22.0477882954585,4.01070328508712,22.4512104389277,4.7717156823066,8.27279279514481,7.84638982461763,8.86917589850256,12.9117134968895,2.22664428346111,2.91436230634034,1.48313777113772,17.2010118636982,12.363211348248,14.0935438149997,16.9328343256793,12.5838880371628,8.54352253057999,0.39752481473341,0.860234595106124,0,0.56530794192401,0.838998872419812,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,3.92484646928281,59.1396622517429,10.1304409331664,6.88527740228738,16.3496873826824,10.2853830837524,2.24271040056923,2.1349799145941,3.20667812942308,0.933633106199299,2.69421344139376,0.980771418680752,0.908144565869588,2.30470369792,0.70296429550139,1.24864030732128,1.71141546463335,2.54062756938062,0.117434498643765,0.809364721840658,0.421352420106746,3.87892925384297,0.491337269247072,2.78979609174567,7.12801714369232,2.22540236350701,0,0.718618141816238,1.17835279767846,1.00094815897571,4.71008996323111,5.26773145057006,2.14541457059314,5.40857012063748,2.49550802952046,5.202299434977,11.1049842185655,3.81477422087211,7.80236849819446,5.66788910811414,3.86460810068444,7.63079110959518,13.6708829115426,3.70260619612555,3.5340728394176,5.61504381718026,2.58633690910099,12.4253357380815,4.73534861669909,1.52604533079439,18.9395636100031,37.911710762126,31.5485054927904,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,17.2094485562798,13.5080597020506,4.14404764057442,3.25057549622385,2.88751792667834,1.41968160047813,2.02301628093722,1.92808823906786,1.7647035637183,1.96091499683166,2.13543557199987,2.29213223872279,1.37355025587742,1.15424147083917,0,1.40241773803446,0.4115740113314,0,0,0,0,0,2.82873408649161,12.1813145311953,10.7555279700453,11.240175325762,8.04231779293047,7.68484094815796,0.325808305310325,1.03993478527958,2.88662684050547,1.97081688457631,16.3198084987792,0.144366447761074,0,0.190254152234598,16.5942923571448,12.0188062693282,1.23108503043699,5.14809383306323,5.64798416697167,6.56136837907439,54.9301559210271,43.0996295616855,19.0759653357067,9.88155390947471,12.651628412452,0.985326475791887,0.616339038092582,0.414656231081544,0.576479813667846,0.12624243342638,19.3033598648194,0.381988425558278,2.34434894420094,6.84289784090821,4.21592720083626,3.90445975197093,2.85826432630578,0.560655421726804,0,1.6134422880609,12.9271715757778,3.57656445851882,0,2.6593811658487,3.12022310734098,0.771622122786426,0,0.532844358032199,1.42977993658148,2.71310802695722,1.64648067356154,0.977208552881205,0.355391948742546,2.37585561880029,13.2633325906218,13.0730018790044,20.1945442187755,1.2162378064119,0.502257091432126,0,1.19812427745791,0,9.98458335285029,15.2020372000958,10.0683398049688,17.7270353607497,0,0.197030760201927,0,0.385029108839245,0.76228387266739,23.4251736943719,35.571285387774,42.0465825989215,44.6557126157214,2.24702107184155,0,1.65766205374414,2.4538298343828,0.500170521059677,0.271265023699736,5.40724239980099,4.99601168632053,7.56971592162886,7.84847480451178,8.12554469264841,0,3.10419213877515,1.32845119707087,5.8998133933345,7.47199084425513,0.391602314925481,0,2.06768026122887,0.862856803274467,1.49418580924822,2.42502057157008,0,3.32629322662648,14.6383606613078,9.51464234385987,5.89386198309454,16.7862285524968,20.4682899626681,28.1494362001313,7.42090332224955,4.93471020168498,4.97172830876756,5.66677376495283,4.15403543346897,2.20799719073923,2.29632954224082,30.276477015796,7.64272208167939,7.46293913069944,8.01201139229555,2.75361271414791,1.35359883872224,4.08181286653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| ||
|short_description=p5@SEMA3C | |short_description=p5@SEMA3C | ||
}} | }} |
Latest revision as of 17:26, 19 September 2015
Short description: | p5@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA3C_5end |
Coexpression cluster: | C958_Synoviocyte_Urothelial_Fibroblast_Ewing_Mallassezderived_Chondrocyte_epithelioid |
Association with transcript: | 15bp_to_ENST00000487621_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic structure | 3.16e-08 | 564 |
developing anatomical structure | 1.84e-07 | 581 |
germ layer | 3.22e-07 | 560 |
germ layer / neural crest | 3.22e-07 | 560 |
embryonic tissue | 3.22e-07 | 560 |
presumptive structure | 3.22e-07 | 560 |
germ layer / neural crest derived structure | 3.22e-07 | 560 |
epiblast (generic) | 3.22e-07 | 560 |
embryo | 8.20e-07 | 592 |