FFCP PHASE1:Hg19::chr18:47340487..47340514,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47340487..47340514,-
|short_description=p7@ACAA2
|description=CAGE_peak_7_at_ACAA2_5end
|association_with_transcript=-204bp_to_uc002ldx.3_5end
|EntrezGen...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-204bp_to_uc002ldx.3_5end | |||
|cluster_id=chr18:47340487..47340514,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_ACAA2_5end | |||
|id=chr18:47340487..47340514,- | |||
|ontology_enrichment_celltype=CL:0000791!7.49e-11!18;CL:0000789!7.49e-11!18;CL:0002420!7.49e-11!18;CL:0002419!7.49e-11!18;CL:0000790!7.49e-11!18;CL:0000084!1.89e-09!25;CL:0000827!1.89e-09!25;CL:0000625!3.36e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.14e-14;18!CL:0000789;3.14e-14;18!CL:0002419;3.14e-14;18!CL:0000084;1.55e-12;25!CL:0000625;2.21e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.57e-14,18;CL:0000789,4.57e-14,18;CL:0002420,4.57e-14,18;CL:0002419,4.57e-14,18;CL:0000790,4.57e-14,18;CL:0000084,1.53e-12,25;CL:0000827,1.53e-12,25;CL:0000625,3.69e-09,11;CL:0000838,1.12e-07,52;CL:0000542,2.44e-07,53;CL:0000051,2.44e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.14e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.76e-07!15;UBERON:0000179!1.76e-07!15;UBERON:0000463!1.76e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-08;15!UBERON:0000179;1.81e-08;15!UBERON:0000463;1.81e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-08,15;UBERON:0000179,1.39e-08,15;UBERON:0000463,1.39e-08,15 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,3.00219895059391,0.446961094427288,0.872338524100369,5.06599756336621,1.26343974685366,2.08948502559871,0.245733936501509,2.79120467188971,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,0.602694528023977,1.46062018077475,1.46379839637152,0,0.204000691244253,1.56727360739044,1.71741592278634,1.50561867580173,1.38096903554283,0.152826811495903,0.410502947249729,0.314843125254717,1.96682138424452,4.98978217526377,2.16742572642506,0.919421224478927,0.6024118375565,0.739508020333575,0.154934401160603,0.995184627411951,0.293600439334847,2.21598163412751,1.80490002723128,8.02940221648652,1.34349284543955,1.29557466407592,0.257575567634187,1.01778767145695,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0,2.01384674625505,1.0246428261164,0.236482229888585,0.689491361473237,0,0,0.564727018627814,0,0,0,0,0.639337125799041,0.989553900560148,0,0,1.45104619314292,0.56738522469114,0.622822248995575,1.7587406567972,1.5644487552606,0.217188844705117,3.02699751316684,0.736555271975129,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0.59675003159727,0.365328307529268,0,1.09227722252426,1.77901850772711,0.853460445133014,0,0,1.32208974556972,0.954053754535364,2.84606484554724,0,2.29363936875137,1.32171328579026,1.12101712596307,1.84368859342554,5.90129310341499,28.689785680689,6.99045096598331,1.17030546773475,5.54067853277104,1.89379122293893,7.79306913631645,0.779873198196215,1.47302953737419,3.54454231333794,1.08321545506006,3.20228299314188,2.34106825607781,8.22189523018381,5.80335037350282,0.579606171470105,2.52087157375503,1.87278579662799,4.18142095219907,1.24640276967323,2.29932296161153,2.40539211837841,1.77113784413652,5.41561204350964,6.51083453856419,8.55406840003537,1.05402583354441,2.55973222308837,2.49861453104692,5.44587679701239,2.46338399076314,13.7092585392818,28.3486607530518,33.164788489161,0,1.34140171940727,0.511450247374121,0.361439152384566,0.50133791063589,1.44846518960824,0,1.45990461090791,0.850813354476611,2.21729397462564,1.14185221401064,1.89919659471683,0.364295288292542,1.11235332835329,2.27183175558278,0.522389211897802,1.06366368415092,1.90792499444274,0,0.74291500265913,0,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0,0.17859945656816,1.34717623575702,0.225222960966644,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0.872188104285069,0.993943903390637,0.633152558322899,3.57504788195691,3.44203944898576,1.06400514659507,1.12135520028461,2.1349799145941,1.2333377420858,0.311211035399766,1.0776853765575,0.326923806226917,0.454072282934794,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.352303495931295,0.161872944368132,1.12360645361799,0,0.737005903870608,0.413303124703062,0,0.247266929278557,0,0,0.673344455816265,0.500474079487857,0,0.877955241761676,0.919463387397059,0.300476117813194,0.680593098960126,1.79389635688862,0.213557388818567,0.423863802319124,1.50045548042201,0.206105058476878,3.34932702059318,0,1.0126579934476,0.194874010322397,1.00973509697646,0.460249493211497,0.323292113637624,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,1.09776335516636,0.530119073285941,0.69716365721711,1.0366105501537,1.7662459561294,1.09493207722749,0,0.643240938192885,2.76269842704961,2.3218396401599,0,1.53798840051797,2.02301628093722,0.482022059766964,2.42646740011267,1.30727666455444,2.84724742933316,3.10112008768378,1.96221465125346,1.92373578473195,0.738155454624648,7.01208869017229,0,0,3.80265104465493,0,2.36315962672562,0,0.614942192715568,0,0.219500570817251,1.1240175325762,1.20634766893957,0.370353780634118,0.325808305310325,0,2.88662684050547,0.34779121492523,0.469634776943287,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,1.18904929830983,0,1.17587489739202,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0.968532774145487,1.03664057770386,0.720599767084807,0.25248486685276,0.190493682876507,0.381988425558278,0,3.4214489204541,0.719792448923265,0.901029173531752,0.857479297891735,0,0,0.07333828582095,0,3.57656445851882,1.690605505112,0,0,0.514414748524284,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,2.05476322550383,0,5.82842748766342,9.06341496928865,23.0721505099684,23.3584326029142,0,0,6.95959931499926,1.34013012267479,6.37938751653163,0,2.99161459204025,0,0.12269149171914,0.500170521059677,1.08506009479894,2.28767947683888,1.42743191037729,2.68094105557689,0.937131319941706,0,0,1.03473071292505,0.664225598535437,0,0.347534457872331,0.979005787313703,0.686286847621712,1.6541442089831,15.747136659759,9.07184241329277,0.303127571446259,3.32870879020994,0.907170879989041,0,1.38115775959256,1.12264037773229,0.640695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| ||
|short_description=p7@ACAA2 | |||
}} | }} |
Latest revision as of 17:59, 19 September 2015
Short description: | p7@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACAA2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -204bp_to_uc002ldx.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.57e-14 | 18 |
alpha-beta T cell | 4.57e-14 | 18 |
immature T cell | 4.57e-14 | 18 |
mature T cell | 4.57e-14 | 18 |
immature alpha-beta T cell | 4.57e-14 | 18 |
T cell | 1.53e-12 | 25 |
pro-T cell | 1.53e-12 | 25 |
CD8-positive, alpha-beta T cell | 3.69e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.12e-07 | 52 |
lymphocyte | 2.44e-07 | 53 |
common lymphoid progenitor | 2.44e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-08 | 15 |
haemolymphatic fluid | 1.39e-08 | 15 |
organism substance | 1.39e-08 | 15 |