FFCP PHASE1:Hg19::chr7:81662303..81662321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |EntrezGene=781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |HGNC=1399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_ENST00000475237_5end | |association_with_transcript=-86bp_to_ENST00000475237_5end | ||
|cluster_id=chr7:81662303..81662321,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_8_at_CACNA2D1_5end | |description=CAGE_peak_8_at_CACNA2D1_5end | ||
|id=chr7:81662303..81662321,- | |id=chr7:81662303..81662321,- | ||
|ontology_enrichment_celltype=CL:0002139!3.94e-25!24;CL:1000413!1.68e-24!9;CL:0002274!1.17e-18!5;CL:0000457!1.17e-18!5;CL:0002191!1.17e-18!5;CL:0000097!1.17e-18!5;CL:0000831!1.17e-18!5;CL:0002028!1.17e-18!5;CL:0000071!1.74e-17!18;CL:0002546!1.74e-17!18;CL:0000115!3.93e-16!35;CL:0002544!6.57e-15!6;CL:0002078!3.88e-12!44;CL:0000163!3.58e-10!9;CL:0005020!2.24e-09!6;CL:0002138!2.24e-09!6;CL:0005022!2.24e-09!6;CL:0000213!1.26e-08!57;CL:0000215!1.26e-08!57 | |ontology_enrichment_celltype=CL:0002139!3.94e-25!24;CL:1000413!1.68e-24!9;CL:0002274!1.17e-18!5;CL:0000457!1.17e-18!5;CL:0002191!1.17e-18!5;CL:0000097!1.17e-18!5;CL:0000831!1.17e-18!5;CL:0002028!1.17e-18!5;CL:0000071!1.74e-17!18;CL:0002546!1.74e-17!18;CL:0000115!3.93e-16!35;CL:0002544!6.57e-15!6;CL:0002078!3.88e-12!44;CL:0000163!3.58e-10!9;CL:0005020!2.24e-09!6;CL:0002138!2.24e-09!6;CL:0005022!2.24e-09!6;CL:0000213!1.26e-08!57;CL:0000215!1.26e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:1000413;3.36e-66;9!CL:0000097;5.06e-49;5!CL:0002139;1.11e-45;24!CL:0002544;2.31e-39;6!CL:0000115;1.64e-34;36!CL:0000071;1.03e-32;18!CL:0000163;2.95e-27;9!CL:0002078;8.29e-20;45!CL:0002138;1.57e-14;6!CL:0000213;8.69e-14;58!CL:0000215;8.69e-14;58 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.99e-66,9;CL:0000097,5.07e-49,5;CL:0002028,5.07e-49,5;CL:0002139,1.32e-45,24;CL:0002544,2.93e-39,6;CL:0000115,1.45e-35,36;CL:0000071,1.12e-32,18;CL:0002546,1.12e-32,18;CL:0002078,4.23e-28,45;CL:0000163,2.95e-27,9;CL:0000213,2.12e-21,58;CL:0000215,2.12e-21,58;CL:0005020,1.73e-14,6;CL:0002138,1.73e-14,6;CL:0005022,1.73e-14,6;CL:0000222,2.76e-09,121;CL:0000076,1.15e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.03e-32;18!CL:0005022;1.57e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;6.76e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,6.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003915!1.68e-24!9;UBERON:0004700!1.68e-24!9;UBERON:0001917!1.68e-24!9;UBERON:0001986!1.74e-17!18;UBERON:0004638!1.74e-17!18;UBERON:0004852!1.74e-17!18;UBERON:0000487!6.51e-14!22;UBERON:0006914!5.49e-12!25;UBERON:0000055!1.72e-11!69;UBERON:0002049!1.73e-09!79;UBERON:0007798!1.73e-09!79;UBERON:0001981!7.13e-08!60;UBERON:0007500!7.13e-08!60;UBERON:0004537!7.13e-08!60;UBERON:0006965!7.13e-08!60;UBERON:0001637!1.04e-07!42;UBERON:0003509!1.04e-07!42;UBERON:0004572!1.04e-07!42;UBERON:0003127!2.23e-07!2;UBERON:0000947!3.29e-07!21;UBERON:0010191!3.29e-07!21;UBERON:0001473!5.01e-07!8;UBERON:0004536!5.01e-07!8;UBERON:0006558!5.01e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;3.36e-66;9!UBERON:0004700;3.36e-66;9!UBERON:0001917;3.36e-66;9!UBERON:0004638;1.03e-32;18!UBERON:0001986;1.03e-32;18!UBERON:0004852;1.03e-32;18!UBERON:0000487;1.31e-26;22!UBERON:0006914;2.59e-23;25!UBERON:0000490;6.15e-18;33!UBERON:0001637;1.99e-13;42!UBERON:0003509;1.99e-13;42!UBERON:0004572;1.99e-13;42!UBERON:0000947;3.21e-11;21!UBERON:0010191;3.21e-11;21!UBERON:0001473;4.83e-11;8!UBERON:0004536;4.83e-11;8!UBERON:0006558;4.83e-11;8!UBERON:0000055;7.77e-10;65!UBERON:0002465;6.11e-09;10!UBERON:0007500;8.29e-08;56!UBERON:0001981;8.29e-08;56!UBERON:0004537;8.29e-08;56!UBERON:0004573;2.67e-07;33!UBERON:0004571;2.67e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.99e-66,9;UBERON:0004700,3.99e-66,9;UBERON:0001917,3.99e-66,9;UBERON:0004638,1.12e-32,18;UBERON:0001986,1.12e-32,18;UBERON:0004852,1.12e-32,18;UBERON:0000487,1.40e-26,22;UBERON:0006914,2.76e-23,25;UBERON:0000055,4.57e-15,68;UBERON:0001637,1.74e-13,42;UBERON:0003509,1.74e-13,42;UBERON:0004572,1.74e-13,42;UBERON:0002049,6.37e-13,78;UBERON:0007798,6.37e-13,78;UBERON:0000947,3.42e-11,21;UBERON:0010191,3.42e-11,21;UBERON:0001473,5.18e-11,8;UBERON:0004536,5.18e-11,8;UBERON:0006558,5.18e-11,8;UBERON:0007500,2.54e-09,59;UBERON:0001981,2.54e-09,59;UBERON:0004537,2.54e-09,59;UBERON:0006965,2.54e-09,59;UBERON:0002465,6.46e-09,10;UBERON:0004535,9.06e-09,109;UBERON:0001009,1.73e-08,112;UBERON:0004573,4.56e-07,33;UBERON:0004571,4.56e-07,33;UBERON:0003081,6.28e-07,203 | |||
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| ||
|short_description=p8@CACNA2D1 | |short_description=p8@CACNA2D1 | ||
}} | }} |
Latest revision as of 18:18, 19 September 2015
Short description: | p8@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CACNA2D1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -86bp_to_ENST00000475237_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.99e-66 | 9 |
mast cell | 5.07e-49 | 5 |
basophil mast progenitor cell | 5.07e-49 | 5 |
endothelial cell of vascular tree | 1.32e-45 | 24 |
aortic endothelial cell | 2.93e-39 | 6 |
endothelial cell | 1.45e-35 | 36 |
blood vessel endothelial cell | 1.12e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.12e-32 | 18 |
meso-epithelial cell | 4.23e-28 | 45 |
endocrine cell | 2.95e-27 | 9 |
lining cell | 2.12e-21 | 58 |
barrier cell | 2.12e-21 | 58 |
lymphangioblast | 1.73e-14 | 6 |
endothelial cell of lymphatic vessel | 1.73e-14 | 6 |
vascular lymphangioblast | 1.73e-14 | 6 |
mesodermal cell | 2.76e-09 | 121 |
squamous epithelial cell | 1.15e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 3.99e-66 | 9 |
arterial system endothelium | 3.99e-66 | 9 |
endothelium of artery | 3.99e-66 | 9 |
blood vessel endothelium | 1.12e-32 | 18 |
endothelium | 1.12e-32 | 18 |
cardiovascular system endothelium | 1.12e-32 | 18 |
simple squamous epithelium | 1.40e-26 | 22 |
squamous epithelium | 2.76e-23 | 25 |
vessel | 4.57e-15 | 68 |
artery | 1.74e-13 | 42 |
arterial blood vessel | 1.74e-13 | 42 |
arterial system | 1.74e-13 | 42 |
vasculature | 6.37e-13 | 78 |
vascular system | 6.37e-13 | 78 |
aorta | 3.42e-11 | 21 |
aortic system | 3.42e-11 | 21 |
lymphatic vessel | 5.18e-11 | 8 |
lymph vasculature | 5.18e-11 | 8 |
lymphatic part of lymphoid system | 5.18e-11 | 8 |
epithelial tube open at both ends | 2.54e-09 | 59 |
blood vessel | 2.54e-09 | 59 |
blood vasculature | 2.54e-09 | 59 |
vascular cord | 2.54e-09 | 59 |
lymphoid system | 6.46e-09 | 10 |
cardiovascular system | 9.06e-09 | 109 |
circulatory system | 1.73e-08 | 112 |
systemic artery | 4.56e-07 | 33 |
systemic arterial system | 4.56e-07 | 33 |
lateral plate mesoderm | 6.28e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 6.14e-11 | 1 |