FFCP PHASE1:Hg19::chr11:67402368..67402378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:67402368..67402378,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr11:67402368..67402378,- | |description=CAGE_peak_at_chr11:67402368..67402378,- | ||
|id=chr11:67402368..67402378,- | |id=chr11:67402368..67402378,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.54e-15!1;DOID:1357!1.54e-15!1;DOID:3493!2.67e-08!2 | |ontology_enrichment_disease=DOID:0050619!1.54e-15!1;DOID:1357!1.54e-15!1;DOID:3493!2.67e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.54e-15!1;UBERON:0001825!1.54e-15!1;UBERON:0002372!3.66e-15!1;UBERON:0001961!3.66e-15!1;UBERON:0001744!3.66e-15!1;UBERON:0001735!3.66e-15!1;UBERON:0005409!4.46e-14!35;UBERON:0000160!7.04e-13!27;UBERON:0000059!2.05e-12!11;UBERON:0004921!6.30e-10!129;UBERON:0004185!6.30e-10!129;UBERON:0001007!7.03e-10!155;UBERON:0001555!7.03e-10!155;UBERON:0007026!7.03e-10!155;UBERON:0004119!5.80e-09!169;UBERON:0000925!5.80e-09!169;UBERON:0006595!5.80e-09!169;UBERON:0001155!2.44e-07!9 | |ontology_enrichment_uberon=UBERON:0001764!1.54e-15!1;UBERON:0001825!1.54e-15!1;UBERON:0002372!3.66e-15!1;UBERON:0001961!3.66e-15!1;UBERON:0001744!3.66e-15!1;UBERON:0001735!3.66e-15!1;UBERON:0005409!4.46e-14!35;UBERON:0000160!7.04e-13!27;UBERON:0000059!2.05e-12!11;UBERON:0004921!6.30e-10!129;UBERON:0004185!6.30e-10!129;UBERON:0001007!7.03e-10!155;UBERON:0001555!7.03e-10!155;UBERON:0007026!7.03e-10!155;UBERON:0004119!5.80e-09!169;UBERON:0000925!5.80e-09!169;UBERON:0006595!5.80e-09!169;UBERON:0001155!2.44e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.49e-35;17!UBERON:0002108;2.34e-32;4!UBERON:0005409;5.02e-28;22!UBERON:0004921;6.91e-20;33!UBERON:0000059;2.02e-15;11!UBERON:0001052;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0001555;1.87e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-35,17;UBERON:0002108,2.34e-32,4;UBERON:0005409,6.80e-25,25;UBERON:0000059,2.02e-15,11;UBERON:0001052,3.42e-11,4;UBERON:0004907,3.22e-09,5;UBERON:0004921,6.01e-09,118;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr11:67402368..67402378,- | |short_description=p@chr11:67402368..67402378,- | ||
}} | }} |
Latest revision as of 19:06, 19 September 2015
Short description: | p@chr11:67402368..67402378, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:67402368..67402378, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.49e-35 | 17 |
small intestine | 2.34e-32 | 4 |
gastrointestinal system | 6.80e-25 | 25 |
large intestine | 2.02e-15 | 11 |
rectum | 3.42e-11 | 4 |
lower digestive tract | 3.22e-09 | 5 |
subdivision of digestive tract | 6.01e-09 | 118 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |