FFCP PHASE2:Hg19::chrX:140336680..140336697,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64663 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14331 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14331 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NY87 | ||
|association_with_transcript=-34bp_to_NM_022661,uc004fbk.2_5end | |association_with_transcript=-34bp_to_NM_022661,uc004fbk.2_5end | ||
|cluster_id=chrX:140336680..140336697,- | |cluster_id=chrX:140336680..140336697,- | ||
Latest revision as of 19:37, 19 September 2015
| Short description: | p2@SPANXC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SPANXC_5end |
| Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
| Association with transcript: | -34bp_to_NM_022661, uc004fbk.2_5end |
| EntrezGene: | SPANXC |
| HGNC: | 14331 |
| UniProt: | Q9NY87 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SPANXC |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of gall bladder | 3.11e-21 | 2 |
| bone matrix secreting cell | 4.66e-21 | 2 |
| osteocyte | 4.66e-21 | 2 |
| osteoclast | 4.66e-21 | 2 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| gallbladder | 1.22e-14 | 3 |
| gall bladder primordium | 1.22e-14 | 3 |
| zone of skin | 3.10e-11 | 4 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| organ system benign neoplasm | 1.48e-40 | 1 |
| skin benign neoplasm | 1.48e-40 | 1 |
| integumentary system benign neoplasm | 1.48e-40 | 1 |
| dermis tumor | 1.48e-40 | 1 |
| cutaneous fibrous histiocytoma | 1.48e-40 | 1 |
| giant cell tumor | 4.66e-21 | 2 |
| bone giant cell tumor | 4.66e-21 | 2 |
| benign neoplasm | 3.10e-11 | 4 |
| connective tissue cancer | 6.34e-08 | 6 |
| musculoskeletal system cancer | 6.34e-08 | 6 |
Showing 1 to 10 of 10 entries
