FFCP PHASE1:Hg19::chr17:36981528..36981539,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:36981528..36981539,- to FFCP PHASE1:Hg19::chr17:36981528..36981539,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54883 | |EntrezGene=54883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25989 | |HGNC=25989 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJK2 | |UniProt=B4DJK2 | ||
|association_with_transcript=28bp_to_ENST00000536127_5end | |||
|cluster_id=chr17:36981528..36981539,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CWC25_5end | |||
|id=chr17:36981528..36981539,- | |||
|ontology_enrichment_celltype=CL:0002057!1.10e-15!42;CL:0000860!3.40e-13!45;CL:0000766!4.16e-10!76;CL:0000763!1.86e-08!112;CL:0000049!1.86e-08!112;CL:0000738!5.54e-08!140;CL:0000557!7.53e-08!71;CL:0000037!1.83e-07!172;CL:0000566!1.83e-07!172;CL:0000839!2.99e-07!70;CL:0000988!4.23e-07!182;CL:0002009!6.15e-07!65;CL:0000094!6.72e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-22;33!CL:0002057;1.48e-22;33!CL:0000473;2.50e-14;39!CL:0000234;2.50e-14;39!CL:0000576;6.76e-11;48!CL:0000094;2.75e-09;8!CL:0000766;2.80e-09;69!CL:0000081;6.20e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.43e-21,42;CL:0002057,3.43e-21,42;CL:0000766,4.28e-18,72;CL:0000473,1.21e-16,48;CL:0000234,1.21e-16,48;CL:0000738,8.87e-16,136;CL:0000988,9.33e-15,177;CL:0000037,1.22e-14,168;CL:0000557,2.19e-14,67;CL:0000763,2.25e-14,108;CL:0000049,2.25e-14,108;CL:0000839,2.26e-13,66;CL:0002032,2.26e-13,161;CL:0000837,2.26e-13,161;CL:0002009,3.10e-13,61;CL:0002194,5.12e-12,59;CL:0000576,5.12e-12,59;CL:0000040,5.12e-12,59;CL:0000559,5.12e-12,59;CL:0002031,7.61e-12,120;CL:0002087,5.09e-11,115;CL:0000094,3.39e-09,8;CL:0000081,9.58e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.49e-10!102;UBERON:0003061!9.49e-10!102;UBERON:0002193!8.08e-08!112;UBERON:0002371!1.41e-07!80;UBERON:0001474!5.12e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-14,98;UBERON:0003061,1.25e-14,98;UBERON:0002371,2.28e-13,76;UBERON:0002193,6.33e-12,108;UBERON:0001474,6.60e-12,82;UBERON:0004765,5.58e-10,90;UBERON:0002405,1.52e-09,93;UBERON:0001434,7.99e-09,100 | |||
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| ||
|short_description=p3@CWC25 | |||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p3@CWC25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CWC25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 28bp_to_ENST00000536127_5end |
EntrezGene: | CWC25 |
HGNC: | 25989 |
UniProt: | B4DJK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.43e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.43e-21 | 42 |
myeloid leukocyte | 4.28e-18 | 72 |
defensive cell | 1.21e-16 | 48 |
phagocyte | 1.21e-16 | 48 |
leukocyte | 8.87e-16 | 136 |
hematopoietic cell | 9.33e-15 | 177 |
hematopoietic stem cell | 1.22e-14 | 168 |
granulocyte monocyte progenitor cell | 2.19e-14 | 67 |
myeloid cell | 2.25e-14 | 108 |
common myeloid progenitor | 2.25e-14 | 108 |
myeloid lineage restricted progenitor cell | 2.26e-13 | 66 |
hematopoietic oligopotent progenitor cell | 2.26e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.26e-13 | 161 |
macrophage dendritic cell progenitor | 3.10e-13 | 61 |
monopoietic cell | 5.12e-12 | 59 |
monocyte | 5.12e-12 | 59 |
monoblast | 5.12e-12 | 59 |
promonocyte | 5.12e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 7.61e-12 | 120 |
nongranular leukocyte | 5.09e-11 | 115 |
granulocyte | 3.39e-09 | 8 |
blood cell | 9.58e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-14 | 98 |
blood island | 1.25e-14 | 98 |
bone marrow | 2.28e-13 | 76 |
hemolymphoid system | 6.33e-12 | 108 |
bone element | 6.60e-12 | 82 |
skeletal element | 5.58e-10 | 90 |
immune system | 1.52e-09 | 93 |
skeletal system | 7.99e-09 | 100 |