FFCP PHASE1:Hg19::chr3:119299336..119299359,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=141 | |EntrezGene=141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=269 | |HGNC=269 | ||
|TSSclassifier=strong | |||
|UniProt=P54922 | |UniProt=P54922 | ||
|association_with_transcript=0bp_to_AK313369_5end | |association_with_transcript=0bp_to_AK313369_5end | ||
|cluster_id=chr3:119299336..119299359,+ | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_12_at_ADPRH_5end | |description=CAGE_peak_12_at_ADPRH_5end | ||
|id=chr3:119299336..119299359,+ | |id=chr3:119299336..119299359,+ | ||
|ontology_enrichment_celltype=CL:0000453!1.39e-28!5;CL:0000990!8.33e-16!8;CL:0000080!2.41e-15!6;CL:0000451!6.84e-13!10;CL:0001014!1.25e-12!2;CL:0001016!1.25e-12!2;CL:0000738!2.13e-10!140;CL:0000988!2.79e-10!182;CL:0000945!3.55e-08!24;CL:0000826!3.55e-08!24;CL:0000037!9.67e-08!172;CL:0000566!9.67e-08!172;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0002031!4.31e-07!124;CL:0000946!4.51e-07!1;CL:0000786!4.51e-07!1;CL:0000980!4.51e-07!1 | |ontology_enrichment_celltype=CL:0000453!1.39e-28!5;CL:0000990!8.33e-16!8;CL:0000080!2.41e-15!6;CL:0000451!6.84e-13!10;CL:0001014!1.25e-12!2;CL:0001016!1.25e-12!2;CL:0000738!2.13e-10!140;CL:0000988!2.79e-10!182;CL:0000945!3.55e-08!24;CL:0000826!3.55e-08!24;CL:0000037!9.67e-08!172;CL:0000566!9.67e-08!172;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0002031!4.31e-07!124;CL:0000946!4.51e-07!1;CL:0000786!4.51e-07!1;CL:0000980!4.51e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000081;2.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0004872;9.43e-11;7 | |||
|ontology_enrichment_disease=DOID:4960!5.37e-07!1;DOID:0070004!5.37e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.60e-08!3;UBERON:0004854!1.60e-08!3;UBERON:0009034!1.60e-08!3;UBERON:0002095!1.60e-08!3;UBERON:0004782!1.60e-08!3;UBERON:0003281!1.60e-08!3;UBERON:0009664!1.60e-08!3;UBERON:0002296!1.60e-08!3;UBERON:0005602!1.60e-08!3;UBERON:0001179!1.60e-08!3;UBERON:0006293!1.60e-08!3;UBERON:0002390!7.12e-08!102;UBERON:0003061!7.12e-08!102;UBERON:0000998!2.66e-07!1;UBERON:0006868!2.66e-07!1;UBERON:0002193!6.19e-07!112;UBERON:0002135!6.38e-07!1;UBERON:0001154!6.76e-07!1;UBERON:0001153!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.66e-23;3!UBERON:0004177;1.71e-14;5!UBERON:0005057;1.71e-14;5!UBERON:0002390;2.91e-09;32!UBERON:0002331;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.27e-23,3;UBERON:0004854,3.27e-23,3;UBERON:0009034,3.27e-23,3;UBERON:0002095,3.27e-23,3;UBERON:0004782,3.27e-23,3;UBERON:0003281,3.27e-23,3;UBERON:0009664,3.27e-23,3;UBERON:0002296,3.27e-23,3;UBERON:0005602,3.27e-23,3;UBERON:0001179,3.27e-23,3;UBERON:0006293,3.27e-23,3;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0002331,6.56e-08,10;UBERON:0000358,6.56e-08,10;UBERON:0000307,6.56e-08,10;UBERON:0000091,6.56e-08,10;UBERON:0000087,6.56e-08,10;UBERON:0007010,6.56e-08,10;UBERON:0007806,6.56e-08,10;UBERON:0008780,6.56e-08,10;UBERON:0005728,6.56e-08,10;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.821005894499457,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,7.2620035222031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0.981392365535065,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,1.19929387109915,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.821005894499457,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,7.2620035222031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0.981392365535065,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,1.19929387109915,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@ADPRH | |short_description=p12@ADPRH | ||
}} | }} |
Latest revision as of 20:36, 19 September 2015
Short description: | p12@ADPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ADPRH_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | 0bp_to_AK313369_5end |
EntrezGene: | ADPRH |
HGNC: | 269 |
UniProt: | P54922 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.27e-23 | 3 |
gastrointestinal system mesentery | 3.27e-23 | 3 |
stomach region | 3.27e-23 | 3 |
mesentery | 3.27e-23 | 3 |
gastrointestinal system serosa | 3.27e-23 | 3 |
mesentery of stomach | 3.27e-23 | 3 |
gut mesentery | 3.27e-23 | 3 |
dorsal mesentery | 3.27e-23 | 3 |
dorsal mesogastrium | 3.27e-23 | 3 |
peritoneal cavity | 3.27e-23 | 3 |
spleen primordium | 3.27e-23 | 3 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
umbilical cord | 6.56e-08 | 10 |
blastocyst | 6.56e-08 | 10 |
blastula | 6.56e-08 | 10 |
bilaminar disc | 6.56e-08 | 10 |
inner cell mass | 6.56e-08 | 10 |
cleaving embryo | 6.56e-08 | 10 |
connecting stalk | 6.56e-08 | 10 |
inner cell mass derived epiblast | 6.56e-08 | 10 |
extraembryonic mesoderm | 6.56e-08 | 10 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.13e-08 | 10 |