FFCP PHASE1:Hg19::chr22:31892454..31892556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9814 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |||
|TSSclassifier=strong | |||
|UniProt=A8K8P3,F8WBU4 | |||
|association_with_transcript=0bp_to_ENST00000400288,ENST00000400289,ENST00000411518,ENST00000444859_5end | |||
|cluster_id=chr22:31892454..31892556,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_SFI1_5end | |||
|id=chr22:31892454..31892556,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.26e-26!53;CL:0000051!2.26e-26!53;CL:0000838!5.08e-26!52;CL:0000084!1.13e-15!25;CL:0000827!1.13e-15!25;CL:0000791!9.54e-13!18;CL:0000789!9.54e-13!18;CL:0002420!9.54e-13!18;CL:0002419!9.54e-13!18;CL:0000790!9.54e-13!18;CL:0000988!3.98e-11!182;CL:0000037!1.01e-10!172;CL:0000566!1.01e-10!172;CL:0000945!5.71e-10!24;CL:0000826!5.71e-10!24;CL:0002032!2.07e-09!165;CL:0000837!2.07e-09!165;CL:0000738!7.55e-09!140;CL:0000625!1.66e-08!11;CL:0000236!2.13e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.49e-16;25!CL:0000542;8.60e-16;53!CL:0000791;7.83e-13;18!CL:0000789;7.83e-13;18!CL:0002419;7.83e-13;18!CL:0000945;4.13e-10;24!CL:0000625;1.43e-08;11!CL:0000236;4.72e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.26e-26,53;CL:0000051,2.26e-26,53;CL:0000838,5.07e-26,52;CL:0000084,1.13e-15,25;CL:0000827,1.13e-15,25;CL:0000791,9.54e-13,18;CL:0000789,9.54e-13,18;CL:0002420,9.54e-13,18;CL:0002419,9.54e-13,18;CL:0000790,9.54e-13,18;CL:0000988,2.85e-11,177;CL:0000037,7.26e-11,168;CL:0000945,5.71e-10,24;CL:0000826,5.71e-10,24;CL:0002032,1.54e-09,161;CL:0000837,1.54e-09,161;CL:0000738,5.34e-09,136;CL:0000625,1.66e-08,11;CL:0000236,2.13e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;8.60e-16;53!CL:0000790;7.83e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.27e-09!15;UBERON:0000179!3.27e-09!15;UBERON:0000463!3.27e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-09;15!UBERON:0000179;2.50e-09;15!UBERON:0000463;2.50e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.27e-09,15;UBERON:0000179,3.27e-09,15;UBERON:0000463,3.27e-09,15 | |||
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| |||
|short_description=p1@SFI1 | |||
}} |
Latest revision as of 20:45, 19 September 2015
Short description: | p1@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFI1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000400288, ENST00000400289, ENST00000411518, ENST00000444859_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | A8K8P3F8WBU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.26e-26 | 53 |
common lymphoid progenitor | 2.26e-26 | 53 |
lymphoid lineage restricted progenitor cell | 5.07e-26 | 52 |
T cell | 1.13e-15 | 25 |
pro-T cell | 1.13e-15 | 25 |
mature alpha-beta T cell | 9.54e-13 | 18 |
alpha-beta T cell | 9.54e-13 | 18 |
immature T cell | 9.54e-13 | 18 |
mature T cell | 9.54e-13 | 18 |
immature alpha-beta T cell | 9.54e-13 | 18 |
hematopoietic cell | 2.85e-11 | 177 |
hematopoietic stem cell | 7.26e-11 | 168 |
lymphocyte of B lineage | 5.71e-10 | 24 |
pro-B cell | 5.71e-10 | 24 |
hematopoietic oligopotent progenitor cell | 1.54e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-09 | 161 |
leukocyte | 5.34e-09 | 136 |
CD8-positive, alpha-beta T cell | 1.66e-08 | 11 |
B cell | 2.13e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 3.27e-09 | 15 |
haemolymphatic fluid | 3.27e-09 | 15 |
organism substance | 3.27e-09 | 15 |