FFCP PHASE1:Hg19::chr2:211523350..211523365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1373 | |EntrezGene=1373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2323 | |HGNC=2323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=243bp_to_ENST00000470791_5end | |association_with_transcript=243bp_to_ENST00000470791_5end | ||
|cluster_id=chr2:211523350..211523365,+ | |||
|coexpression_cluster_id=C768 | |coexpression_cluster_id=C768 | ||
|description=CAGE_peak_10_at_CPS1_5end | |description=CAGE_peak_10_at_CPS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!4.75e-15!3;CL:0000861!4.75e-15!3 | |ontology_enrichment_celltype=CL:0002150!4.75e-15!3;CL:0000861!4.75e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | |ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.07e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.02e-18;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.02e-18;29 | ||
|ontology_enrichment_disease=DOID:305!4.14e-08!106 | |ontology_enrichment_disease=DOID:305!4.14e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.07e-43!9;UBERON:0001557!7.93e-20!19;UBERON:0008947!3.82e-11!38;UBERON:0003258!3.82e-11!38;UBERON:0004921!4.72e-09!129;UBERON:0004185!4.72e-09!129;UBERON:0000072!7.15e-09!46;UBERON:0001007!8.69e-09!155;UBERON:0001555!8.69e-09!155;UBERON:0007026!8.69e-09!155;UBERON:0001041!6.02e-08!98;UBERON:0004119!1.09e-07!169;UBERON:0000925!1.09e-07!169;UBERON:0006595!1.09e-07!169;UBERON:0000065!1.88e-07!53;UBERON:0000077!5.40e-07!130 | |ontology_enrichment_uberon=UBERON:0001737!1.07e-43!9;UBERON:0001557!7.93e-20!19;UBERON:0008947!3.82e-11!38;UBERON:0003258!3.82e-11!38;UBERON:0004921!4.72e-09!129;UBERON:0004185!4.72e-09!129;UBERON:0000072!7.15e-09!46;UBERON:0001007!8.69e-09!155;UBERON:0001555!8.69e-09!155;UBERON:0007026!8.69e-09!155;UBERON:0001041!6.02e-08!98;UBERON:0004119!1.09e-07!169;UBERON:0000925!1.09e-07!169;UBERON:0006595!1.09e-07!169;UBERON:0000065!1.88e-07!53;UBERON:0000077!5.40e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-58;9!UBERON:0001557;1.57e-58;9!UBERON:0000065;2.22e-14;44!UBERON:0000072;4.81e-12;37!UBERON:0002107;5.54e-08;19!UBERON:0006925;5.54e-08;19!UBERON:0001004;3.76e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-58;9!UBERON:0001557;1.57e-58;9!UBERON:0000065;2.22e-14;44!UBERON:0000072;4.81e-12;37!UBERON:0002107;5.54e-08;19!UBERON:0006925;5.54e-08;19!UBERON:0001004;3.76e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.11e-58,9;UBERON:0001557,4.07e-28,19;UBERON:0008947,2.08e-14,38;UBERON:0003258,2.08e-14,38;UBERON:0001041,4.44e-14,87;UBERON:0000072,9.13e-12,47;UBERON:0004921,2.09e-10,118;UBERON:0000065,2.58e-10,54;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0002107,5.16e-08,19;UBERON:0006925,5.16e-08,19;UBERON:0008836,5.16e-08,19;UBERON:0001048,7.94e-08,160;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0001004,1.15e-07,74;UBERON:0008835,4.79e-07,22;UBERON:0003894,4.79e-07,22;UBERON:0009854,8.87e-07,23 | |||
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|short_description=p10@CPS1 | |short_description=p10@CPS1 | ||
}} | }} |
Latest revision as of 22:34, 19 September 2015
Short description: | p10@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CPS1_5end |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | 243bp_to_ENST00000470791_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.07e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.11e-58 | 9 |
upper respiratory tract | 4.07e-28 | 19 |
respiratory primordium | 2.08e-14 | 38 |
endoderm of foregut | 2.08e-14 | 38 |
foregut | 4.44e-14 | 87 |
segment of respiratory tract | 9.13e-12 | 47 |
subdivision of digestive tract | 2.09e-10 | 118 |
respiratory tract | 2.58e-10 | 54 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
liver | 5.16e-08 | 19 |
digestive gland | 5.16e-08 | 19 |
liver bud | 5.16e-08 | 19 |
primordium | 7.94e-08 | 160 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |
respiratory system | 1.15e-07 | 74 |
hepatic diverticulum | 4.79e-07 | 22 |
liver primordium | 4.79e-07 | 22 |
digestive tract diverticulum | 8.87e-07 | 23 |