FFCP PHASE1:Hg19::chr14:38064536..38064550,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:38064536..38064550,-
|short_description=p7@FOXA1
|description=CAGE_peak_7_at_FOXA1_5end
|association_with_transcript=-47bp_to_NM_004496,uc001wuf.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=-47bp_to_NM_004496,uc001wuf.2_5end | |||
|cluster_id=chr14:38064536..38064550,- | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_7_at_FOXA1_5end | |||
|id=chr14:38064536..38064550,- | |||
|ontology_enrichment_celltype=CL:0000066!3.64e-20!254;CL:0000223!6.87e-10!59;CL:0002076!1.58e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.82e-13;1!CL:0002563;6.83e-13;4!CL:0002253;3.18e-07;2!CL:1000415;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.38e-13,1;CL:0002563,6.84e-13,4;CL:0000066,1.61e-08,253;CL:0002253,3.09e-07,2;CL:1000415,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.38e-16;3!UBERON:0003353;2.38e-16;3!UBERON:0008425;1.61e-13;1 | |||
|ontology_enrichment_disease=DOID:305!1.65e-38!106;DOID:0050687!1.87e-26!143;DOID:162!4.92e-15!235;DOID:14566!1.92e-14!239;DOID:5093!1.23e-11!4;DOID:1612!1.23e-11!4;DOID:7!1.24e-09!39;DOID:4362!2.40e-07!5;DOID:1749!2.50e-07!14;DOID:1324!5.48e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.40e-48;4!DOID:1612;5.40e-48;4!DOID:7;1.00e-08;39!DOID:3119;3.68e-08;14!DOID:299;7.32e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.41e-48,4;DOID:1612,5.41e-48,4;DOID:305,5.01e-12,106;DOID:7,1.31e-10,39;DOID:0050687,1.58e-08,143;DOID:3119,3.59e-08,14;DOID:299,7.25e-08,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000310;1.94e-19;10!UBERON:0001443;1.06e-17;11!UBERON:0001242;6.83e-13;4!UBERON:0001262;6.83e-13;4!UBERON:0004786;6.83e-13;4!UBERON:0004808;6.83e-13;4!UBERON:0001277;6.83e-13;4!UBERON:0002367;3.85e-10;11!UBERON:0010147;3.85e-10;11!UBERON:0003937;2.43e-09;12!UBERON:0005399;2.43e-09;12!UBERON:0000485;9.55e-08;7!UBERON:0003929;9.55e-08;7!UBERON:0002423;1.24e-07;25!UBERON:0002530;5.58e-07;57!UBERON:0003350;7.01e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.94e-19,10;UBERON:0001443,1.06e-17,11;UBERON:0003929,2.19e-16,54;UBERON:0005911,6.32e-13,82;UBERON:0001242,6.84e-13,4;UBERON:0001262,6.84e-13,4;UBERON:0004786,6.84e-13,4;UBERON:0004808,6.84e-13,4;UBERON:0001277,6.84e-13,4;UBERON:0002367,3.91e-10,11;UBERON:0010147,3.91e-10,11;UBERON:0009846,3.91e-10,11;UBERON:0003353,3.91e-10,11;UBERON:0004902,3.91e-10,11;UBERON:0003820,3.91e-10,11;UBERON:0009847,3.91e-10,11;UBERON:0001046,4.11e-10,19;UBERON:0003937,2.46e-09,12;UBERON:0005399,2.46e-09,12;UBERON:0009569,3.56e-09,112;UBERON:0002530,4.71e-09,59;UBERON:0002100,3.60e-08,199;UBERON:0000162,4.48e-08,14;UBERON:0001353,4.48e-08,14;UBERON:0000163,4.48e-08,14;UBERON:0006866,4.48e-08,14;UBERON:0000164,4.48e-08,14;UBERON:0000931,4.48e-08,14;UBERON:0005153,7.15e-08,37;UBERON:0009497,1.26e-07,25;UBERON:0000015,1.26e-07,25;UBERON:0002423,1.26e-07,25;UBERON:0006235,1.26e-07,25;UBERON:0004161,1.26e-07,25;UBERON:0004122,1.43e-07,15;UBERON:0003350,7.01e-07,8;UBERON:0003064,7.12e-07,28;UBERON:0004921,7.74e-07,118 | |||
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| ||
|short_description=p7@FOXA1 | |||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p7@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -47bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.38e-13 | 1 |
intestinal epithelial cell | 6.84e-13 | 4 |
epithelial cell | 1.61e-08 | 253 |
epithelial cell of large intestine | 3.09e-07 | 2 |
epithelial cell of gall bladder | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.41e-48 | 4 |
breast cancer | 5.41e-48 | 4 |
carcinoma | 5.01e-12 | 106 |
disease of anatomical entity | 1.31e-10 | 39 |
cell type cancer | 1.58e-08 | 143 |
gastrointestinal system cancer | 3.59e-08 | 14 |
adenocarcinoma | 7.25e-08 | 25 |