FFCP PHASE1:Hg19::chr3:12200889..12200900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7079 | |EntrezGene=7079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11823 | |HGNC=11823 | ||
|TSSclassifier=strong | |||
|UniProt=Q99727 | |UniProt=Q99727 | ||
|association_with_transcript=-38bp_to_ENST00000287814,NM_003256_5end | |association_with_transcript=-38bp_to_ENST00000287814,NM_003256_5end | ||
|cluster_id=chr3:12200889..12200900,- | |||
|description=CAGE_peak_8_at_TIMP4_5end | |description=CAGE_peak_8_at_TIMP4_5end | ||
|id=chr3:12200889..12200900,- | |id=chr3:12200889..12200900,- | ||
|ontology_enrichment_celltype=CL:0000136!6.54e-10!15;CL:0002521!1.00e-07!3 | |ontology_enrichment_celltype=CL:0000136!6.54e-10!15;CL:0002521!1.00e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002521;2.94e-23;3!CL:0000136;3.52e-12;13!CL:0002561;1.33e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.68e-23,3;CL:0000136,9.76e-11,15;CL:0002561,1.33e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.14e-07;3!UBERON:0003057;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-40!115;UBERON:0002616!8.45e-19!59;UBERON:0000955!2.95e-17!69;UBERON:0006238!2.95e-17!69;UBERON:0005743!3.58e-17!86;UBERON:0001017!4.93e-17!82;UBERON:0001049!1.66e-16!57;UBERON:0005068!1.66e-16!57;UBERON:0006241!1.66e-16!57;UBERON:0007135!1.66e-16!57;UBERON:0000073!1.12e-14!94;UBERON:0001016!1.12e-14!94;UBERON:0003075!1.04e-12!86;UBERON:0007284!1.04e-12!86;UBERON:0002298!6.03e-12!8;UBERON:0002346!8.66e-12!90;UBERON:0002780!6.35e-11!41;UBERON:0001890!6.35e-11!41;UBERON:0006240!6.35e-11!41;UBERON:0003080!1.47e-10!42;UBERON:0002308!4.69e-10!9;UBERON:0000125!4.69e-10!9;UBERON:0002020!1.71e-09!34;UBERON:0003528!1.71e-09!34;UBERON:0001893!2.94e-09!34;UBERON:0000153!4.10e-09!129;UBERON:0007811!4.10e-09!129;UBERON:0002791!2.06e-08!33;UBERON:0000033!2.20e-08!123;UBERON:0002190!1.00e-07!3;UBERON:0003076!1.30e-07!15;UBERON:0003057!1.30e-07!15;UBERON:0004733!1.78e-07!12;UBERON:0002028!1.78e-07!12;UBERON:0007277!1.78e-07!12;UBERON:0002300!2.59e-07!3;UBERON:0001869!2.90e-07!32;UBERON:0006331!4.79e-07!3;UBERON:0009663!6.44e-07!7;UBERON:0003056!7.03e-07!61;UBERON:0001896!7.92e-07!3;UBERON:0005290!7.92e-07!3;UBERON:0010096!7.92e-07!3;UBERON:0004732!8.28e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.94e-23;3!UBERON:0002134;7.36e-18;1!UBERON:0005208;7.36e-18;1!UBERON:0004145;7.36e-18;1!UBERON:0005946;7.36e-18;1!UBERON:0005965;7.36e-18;1!UBERON:0002078;7.36e-18;1!UBERON:0002072;2.25e-14;5!UBERON:0003127;1.33e-09;2!UBERON:0000341;1.33e-09;2!UBERON:0002081;1.33e-09;2!UBERON:0002133;1.33e-09;2!UBERON:0005933;1.33e-09;2!UBERON:0005942;1.33e-09;2!UBERON:0005932;1.33e-09;2!UBERON:0001896;8.14e-07;3!UBERON:0002240;8.14e-07;3!UBERON:0003978;8.14e-07;3!UBERON:0004151;8.14e-07;3!UBERON:0000946;8.14e-07;3!UBERON:0005174;8.14e-07;3!UBERON:0005290;8.14e-07;3!UBERON:0001137;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.68e-23,3;UBERON:0002134,8.72e-18,1;UBERON:0005208,8.72e-18,1;UBERON:0005946,8.72e-18,1;UBERON:0005965,8.72e-18,1;UBERON:0002078,8.72e-18,1;UBERON:0002072,1.61e-14,5;UBERON:0000341,1.03e-09,2;UBERON:0005933,1.33e-09,2;UBERON:0005942,1.33e-09,2;UBERON:0005932,1.33e-09,2;UBERON:0002081,1.44e-09,2;UBERON:0002133,1.44e-09,2;UBERON:0010227,1.44e-09,2;UBERON:0003127,2.02e-09,2;UBERON:0003978,8.62e-07,3;UBERON:0009751,8.62e-07,3;UBERON:0004151,8.62e-07,3;UBERON:0000946,8.62e-07,3;UBERON:0002523,8.62e-07,3;UBERON:0005983,8.62e-07,3;UBERON:0004145,8.62e-07,3;UBERON:0002165,8.62e-07,3;UBERON:0002062,8.62e-07,3;UBERON:0007280,8.62e-07,3;UBERON:0001896,9.12e-07,3;UBERON:0005290,9.12e-07,3;UBERON:0010096,9.12e-07,3;UBERON:0002240,9.64e-07,3;UBERON:0005174,9.64e-07,3;UBERON:0001137,9.64e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0.631719873426831,1.82829939739887,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.591095237907095,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,1.43574604915363,0.798716001995964,1.71690419254628,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,1.5041393641362,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,1.17785080268967,0,0,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.860037498908708,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,0,0,0,0.12729431655633,0,0,0,0,1.07583308089015,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0.631719873426831,1.82829939739887,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.591095237907095,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,1.43574604915363,0.798716001995964,1.71690419254628,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,1.5041393641362,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,1.17785080268967,0,0,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.860037498908708,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,0,0,0,0.12729431655633,0,0,0,0,1.07583308089015,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p8@TIMP4 | |short_description=p8@TIMP4 | ||
}} | }} |
Latest revision as of 23:33, 19 September 2015
Short description: | p8@TIMP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TIMP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000287814, NM_003256_5end |
EntrezGene: | TIMP4 |
HGNC: | 11823 |
UniProt: | Q99727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.68e-23 | 3 |
fat cell | 9.76e-11 | 15 |
outer root sheath cell | 1.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.68e-23 | 3 |
tricuspid valve | 8.72e-18 | 1 |
right atrium valve | 8.72e-18 | 1 |
outflow tract of atrium | 8.72e-18 | 1 |
outflow part of right atrium | 8.72e-18 | 1 |
right cardiac atrium | 8.72e-18 | 1 |
hypodermis | 1.61e-14 | 5 |
throat | 1.03e-09 | 2 |
hair root sheath | 1.33e-09 | 2 |
hair outer root sheath | 1.33e-09 | 2 |
bulb of hair follicle | 1.33e-09 | 2 |
cardiac atrium | 1.44e-09 | 2 |
atrioventricular valve | 1.44e-09 | 2 |
future cardiac atrium | 1.44e-09 | 2 |
open tracheal system trachea | 2.02e-09 | 2 |
valve | 8.62e-07 | 3 |
cardiac mesenchyme | 8.62e-07 | 3 |
cardiac chamber | 8.62e-07 | 3 |
cardial valve | 8.62e-07 | 3 |
tunica intima | 8.62e-07 | 3 |
heart layer | 8.62e-07 | 3 |
outflow tract | 8.62e-07 | 3 |
endocardium | 8.62e-07 | 3 |
endocardial cushion | 8.62e-07 | 3 |
presumptive endocardium | 8.62e-07 | 3 |
medulla oblongata | 9.12e-07 | 3 |
myelencephalon | 9.12e-07 | 3 |
future myelencephalon | 9.12e-07 | 3 |
spinal cord | 9.64e-07 | 3 |
dorsal region element | 9.64e-07 | 3 |
dorsum | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.46e-10 | 2 |