FFCP PHASE1:Hg19::chr2:21234502..21234510,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=218bp_to_M17367_5end | |||
|cluster_id=chr2:21234502..21234510,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_43_at_APOB_5end | |||
|id=chr2:21234502..21234510,- | |||
|ontology_enrichment_celltype=CL:0000181!6.59e-43!12;CL:0000417!6.59e-43!12;CL:0000668!6.59e-43!12;CL:0000414!6.59e-43!12;CL:0000412!6.59e-43!12;CL:0000182!6.59e-43!12;CL:0000223!1.83e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.29e-84;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.29e-84,12;CL:0000223,7.88e-18,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.25e-41;11!UBERON:0009497;5.41e-35;13!UBERON:0001041;1.56e-15;30!UBERON:0003104;6.74e-15;31!CL:0000223;5.40e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.39e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.45e-36!19;UBERON:0006925!1.45e-36!19;UBERON:0008836!1.45e-36!19;UBERON:0008835!1.55e-31!22;UBERON:0003894!1.55e-31!22;UBERON:0009854!3.77e-30!23;UBERON:0007499!1.04e-27!25;UBERON:0009497!1.04e-27!25;UBERON:0000015!1.04e-27!25;UBERON:0002423!1.04e-27!25;UBERON:0006235!1.04e-27!25;UBERON:0004161!1.04e-27!25;UBERON:0005057!1.24e-26!26;UBERON:0009856!1.24e-26!26;UBERON:0002365!2.82e-22!31;UBERON:0002330!2.82e-22!31;UBERON:0002368!1.10e-19!35;UBERON:0003929!2.47e-16!54;UBERON:0000949!3.27e-15!45;UBERON:0005172!2.34e-12!55;UBERON:0005173!2.34e-12!55;UBERON:0004921!3.85e-12!129;UBERON:0004185!3.85e-12!129;UBERON:0002530!1.74e-11!59;UBERON:0002417!4.31e-11!61;UBERON:0000916!4.31e-11!61;UBERON:0005911!1.62e-10!82;UBERON:0001007!6.49e-10!155;UBERON:0001555!6.49e-10!155;UBERON:0007026!6.49e-10!155;UBERON:0004119!5.40e-09!169;UBERON:0000925!5.40e-09!169;UBERON:0006595!5.40e-09!169;UBERON:0000160!2.57e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.97e-72;19!UBERON:0006925;1.97e-72;19!UBERON:0002423;3.43e-55;25!UBERON:0002365;1.16e-43;31!UBERON:0002330;1.16e-43;31!UBERON:0002368;7.54e-37;33!UBERON:0000949;1.24e-29;43!UBERON:0005172;6.70e-17;52!UBERON:0005173;6.70e-17;52!UBERON:0002530;2.38e-15;57!UBERON:0002417;3.18e-14;58!UBERON:0000916;3.18e-14;58!UBERON:0001007;6.86e-11;81!UBERON:0009569;7.20e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.97e-72,19;UBERON:0006925,1.97e-72,19;UBERON:0008836,1.97e-72,19;UBERON:0008835,1.23e-62,22;UBERON:0003894,1.23e-62,22;UBERON:0009854,6.11e-60,23;UBERON:0007499,3.43e-55,25;UBERON:0009497,3.43e-55,25;UBERON:0000015,3.43e-55,25;UBERON:0002423,3.43e-55,25;UBERON:0006235,3.43e-55,25;UBERON:0004161,3.43e-55,25;UBERON:0009856,4.32e-53,26;UBERON:0002365,1.29e-44,31;UBERON:0002330,1.29e-44,31;UBERON:0002368,1.42e-39,35;UBERON:0000949,6.99e-31,45;UBERON:0003929,8.37e-26,54;UBERON:0005172,8.37e-26,54;UBERON:0005173,8.37e-26,54;UBERON:0002530,1.20e-23,59;UBERON:0002417,2.92e-23,60;UBERON:0000916,2.92e-23,60;UBERON:0005911,4.16e-17,82;UBERON:0001041,3.85e-16,87;UBERON:0005177,6.14e-14,101;UBERON:0009569,1.36e-12,112;UBERON:0003914,4.62e-12,117;UBERON:0004921,7.31e-12,118;UBERON:0005256,1.42e-11,122;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000490,1.43e-09,148;UBERON:0001048,7.33e-09,160;UBERON:0003104,7.33e-09,160;UBERON:0009142,7.33e-09,160;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000025,2.32e-07,192;UBERON:0002100,3.86e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,3.9313088667105,2.36315962672562,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9937609276745,3.70871362715249,2.76354529802158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90517903781507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p43@APOB | |||
}} |
Latest revision as of 23:40, 19 September 2015
Short description: | p43@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 218bp_to_M17367_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.29e-84 | 12 |
endodermal cell | 7.88e-18 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.11e-07 | 39 |