FFCP PHASE1:Hg19::chr14:39648576..39648634,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:39648576..39648634,+
|short_description=p7@PNN
|description=CAGE_peak_7_at_PNN_5end
|association_with_transcript=48bp_to_AK300164_5end
|EntrezGene=5411
...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5411 | |EntrezGene=5411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9162 | |HGNC=9162 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTD4 | |UniProt=B4DTD4 | ||
|association_with_transcript=48bp_to_AK300164_5end | |||
|cluster_id=chr14:39648576..39648634,+ | |||
|coexpression_cluster_id=C664 | |||
|description=CAGE_peak_7_at_PNN_5end | |||
|id=chr14:39648576..39648634,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.58e-32!235;DOID:14566!1.28e-30!239;DOID:0050687!1.61e-15!143;DOID:0050686!1.71e-15!137;DOID:2531!5.55e-15!51;DOID:0060083!5.55e-15!51;DOID:1240!3.67e-13!39;DOID:305!2.23e-11!106;DOID:8692!1.32e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.80e-11;31!DOID:1240;4.71e-11;39!DOID:2531;3.64e-10;51!DOID:0060083;3.64e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.59e-29,235;DOID:14566,1.26e-28,239;DOID:2531,7.96e-16,51;DOID:0060083,7.96e-16,51;DOID:0050686,1.33e-14,137;DOID:0050687,1.38e-14,143;DOID:1240,4.17e-14,39;DOID:8692,2.41e-11,31;DOID:305,1.20e-10,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.16e-07,89;UBERON:0001017,5.33e-07,81;UBERON:0001049,7.69e-07,56;UBERON:0005068,7.69e-07,56;UBERON:0006241,7.69e-07,56;UBERON:0007135,7.69e-07,56 | |||
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| ||
|short_description=p7@PNN | |||
}} | }} |
Latest revision as of 00:11, 20 September 2015
Short description: | p7@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PNN_5end |
Coexpression cluster: | C664_medulloblastoma_acute_diffuse_small_gall_neuroectodermal_gastrointestinal |
Association with transcript: | 48bp_to_AK300164_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | B4DTD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.16e-07 | 89 |
central nervous system | 5.33e-07 | 81 |
neural tube | 7.69e-07 | 56 |
neural rod | 7.69e-07 | 56 |
future spinal cord | 7.69e-07 | 56 |
neural keel | 7.69e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.59e-29 | 235 |
disease of cellular proliferation | 1.26e-28 | 239 |
hematologic cancer | 7.96e-16 | 51 |
immune system cancer | 7.96e-16 | 51 |
organ system cancer | 1.33e-14 | 137 |
cell type cancer | 1.38e-14 | 143 |
leukemia | 4.17e-14 | 39 |
myeloid leukemia | 2.41e-11 | 31 |
carcinoma | 1.20e-10 | 106 |