FFCP PHASE1:Hg19::chr1:204121298..204121312,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:204121298..204121312,- to FFCP PHASE1:Hg19::chr1:204121298..204121312,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVF9 | |UniProt=Q9NVF9 | ||
|association_with_transcript=0bp_to_ENST00000367199,NM_018208,uc001han.3,uc001hao.3,uc010pqs.1,uc010pqt.1_5end | |||
|cluster_id=chr1:204121298..204121312,- | |||
|description=CAGE_peak_8_at_ETNK2_5end | |||
|id=chr1:204121298..204121312,- | |||
|ontology_enrichment_celltype=CL:0000066!5.06e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.05e-14;4!CL:0000731;2.05e-14;4!CL:0000349;1.79e-13;19!CL:0002537;1.10e-11;5!CL:0002577;1.27e-11;3!CL:1000746;4.42e-08;7!CL:1000612;4.42e-08;7!CL:0002188;7.80e-07;5!CL:0000075;9.11e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.33e-14,4;CL:0000731,1.33e-14,4;CL:0000349,1.47e-13,19;CL:0002577,9.42e-12,3;CL:0002537,1.22e-11,5;CL:1000746,9.05e-08,7;CL:1000612,9.05e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.09e-11!86;UBERON:0001017!2.24e-10!82;UBERON:0004121!9.82e-10!169;UBERON:0000468!2.17e-09!659;UBERON:0000073!4.33e-09!94;UBERON:0001016!4.33e-09!94;UBERON:0000924!4.49e-09!173;UBERON:0006601!4.49e-09!173;UBERON:0000475!6.32e-09!365;UBERON:0000483!6.56e-09!309;UBERON:0000119!1.01e-08!312;UBERON:0007023!1.19e-08!115;UBERON:0000955!1.41e-08!69;UBERON:0006238!1.41e-08!69;UBERON:0006554!4.83e-08!44;UBERON:0001008!1.35e-07!45;UBERON:0004111!1.50e-07!241;UBERON:0000467!1.70e-07!625;UBERON:0000033!2.12e-07!123;UBERON:0000480!2.31e-07!626;UBERON:0005156!2.85e-07!59;UBERON:0000990!2.85e-07!59;UBERON:0000153!3.44e-07!129;UBERON:0007811!3.44e-07!129;UBERON:0000922!3.73e-07!612;UBERON:0005631!4.46e-07!14;UBERON:0000158!4.46e-07!14;UBERON:0001049!6.14e-07!57;UBERON:0005068!6.14e-07!57;UBERON:0006241!6.14e-07!57;UBERON:0007135!6.14e-07!57;UBERON:0000064!6.59e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.87e-12;7!UBERON:0005631;4.76e-12;10!UBERON:0000158;4.76e-12;10!UBERON:0000365;1.53e-11;5!UBERON:0000478;2.66e-10;24!UBERON:0005910;1.28e-09;6!UBERON:0001987;8.23e-09;4!UBERON:0000074;4.42e-08;7!UBERON:0001229;4.42e-08;7!UBERON:0006554;9.93e-08;30!UBERON:0001008;9.93e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.87e-19,14;UBERON:0000158,4.87e-19,14;UBERON:0000305,1.29e-12,7;UBERON:0000365,1.09e-11,5;UBERON:0006554,3.33e-11,47;UBERON:0004871,5.42e-11,8;UBERON:0001008,6.66e-11,48;UBERON:0000478,2.29e-10,24;UBERON:0005910,9.67e-10,6;UBERON:0001987,6.59e-09,4;UBERON:0004340,6.59e-09,4;UBERON:0003124,2.53e-08,7;UBERON:0010532,9.05e-08,7;UBERON:0000074,9.05e-08,7;UBERON:0001229,9.05e-08,7;UBERON:0001230,9.05e-08,7;UBERON:0003220,9.05e-08,7;UBERON:0005749,9.05e-08,7;UBERON:0004199,9.05e-08,7;UBERON:0004209,9.05e-08,7;UBERON:0004198,9.05e-08,7;UBERON:0004876,2.18e-07,11;UBERON:0005103,8.41e-07,8;UBERON:0000083,8.41e-07,8;UBERON:0009201,8.41e-07,8;UBERON:0006553,8.41e-07,8;UBERON:0003074,8.41e-07,8;UBERON:0003060,8.41e-07,8 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.704772020479856,0,0,0,0,0.631719873426831,0,0.737201809504527,1.39560233594486,0.655324116390517,1.84636884759917,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,1.24430121722827,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0.419499436209906,0.825354125820202,0.626984899610432,0,0.35576626268671,0.33472061276467,1.61131726843659,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.337834441449967,1.53316637465883,0,0.732806975721629,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0.206105058476878,0,0.558350568994769,0,0,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.508681776931463,0.57978255948989,0,0.286804595389004,0.487894824518382,0.662648841607426,0.464775771478074,0.310983165046111,0.756962552626885,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0.658501712451753,0,0.100528972411631,0.833296006426766,0,0,1.44331342025273,0.811512834825538,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.581267877027924,0,0,0,0.207328115540772,0.144119953416961,0,0.317489471460845,3.05590740446622,1.17217447210047,0,0.514137463516618,0.300343057843917,1.42913216315289,0,0,0.36669142910475,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.394061520403854,0,0,0.508189248444927,2.60279707715243,0,0.670065061337395,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.713715955188647,1.26161932027148,0.702848489956279,0.601892199455438,0,2.0694614258501,0,0.368738337083406,0.347534457872331,0.783204629850962,0,0,0,0.106727557803444,1.5156378572313,3.32870879020994,3.32629322662648,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0.601519410909855,1.93370076765382,0.114814448164607,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,3.08454505380579,0.541892875087706,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.515205058238611,0.915694648183434,0.330037999682352,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,0.534192213880424,0.495854746082934,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0.37064843820784,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0.855877976067841,0,1.56989728039846,0.539617372749944,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0.392996164052485,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0.699869440489966,1.25088746543166,1.34060455107157,0,0.659006605437454,2.15252686335615,1.68471475667626,1.33029046061003,2.75668080248351,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,1.78178808499583,3.07160702099232,0,0.844016498463076,0,0,0,1.39473591775749,0,0.503865495708552,0.613612095012929,0,0.311039587661807,0.359473404589307,0,0,0.887790650732402,0,0,0.969332746095218,0.371072392647405,9.98068990005971,1.5625665665114,3.49839999984783,0.724999575434793,0.341380344856499,0,0.945550727071745,0.344743373241465,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.278847488557207,0.692552326534174,0,0.922255617552241,0.0897576444097721,0.434589487688032,0.638002319463839,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.471807930864739,0.802577647298789,0.234264445725339,0,0,0,1.18375320854817,0,1.53036380815245,0.31593289814244,0.751617097072463,0.311064574191741,1.32930774541437,0.330991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| 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| ||
|short_description=p8@ETNK2 | |||
}} | }} |
Latest revision as of 00:27, 20 September 2015
Short description: | p8@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ETNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367199, NM_018208, uc001han.3, uc001hao.3, uc010pqs.1, uc010pqt.1_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | Q9NVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.33e-14 | 4 |
urothelial cell | 1.33e-14 | 4 |
extraembryonic cell | 1.47e-13 | 19 |
placental epithelial cell | 9.42e-12 | 3 |
amnion mesenchymal stem cell | 1.22e-11 | 5 |
glomerular cell | 9.05e-08 | 7 |
kidney corpuscule cell | 9.05e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.87e-19 | 14 |
membranous layer | 4.87e-19 | 14 |
amnion | 1.29e-12 | 7 |
urothelium | 1.09e-11 | 5 |
urinary system structure | 3.33e-11 | 47 |
somatic layer of lateral plate mesoderm | 5.42e-11 | 8 |
renal system | 6.66e-11 | 48 |
extraembryonic structure | 2.29e-10 | 24 |
transitional epithelium | 9.67e-10 | 6 |
placenta | 6.59e-09 | 4 |
allantois | 6.59e-09 | 4 |
chorion | 2.53e-08 | 7 |
primitive nephron | 9.05e-08 | 7 |
renal glomerulus | 9.05e-08 | 7 |
renal corpuscle | 9.05e-08 | 7 |
glomerular capsule | 9.05e-08 | 7 |
metanephric mesenchyme | 9.05e-08 | 7 |
glomerular tuft | 9.05e-08 | 7 |
S-shaped body | 9.05e-08 | 7 |
renal vesicle | 9.05e-08 | 7 |
comma-shaped body | 9.05e-08 | 7 |
urogenital ridge | 2.18e-07 | 11 |
mesonephric epithelium | 8.41e-07 | 8 |
mesonephric tubule | 8.41e-07 | 8 |
nephric duct | 8.41e-07 | 8 |
renal duct | 8.41e-07 | 8 |
mesonephric duct | 8.41e-07 | 8 |
pronephric duct | 8.41e-07 | 8 |