FFCP PHASE1:Hg19::chr22:36044174..36044221,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:36044174..36044221,+
|short_description=p5@APOL6
|description=CAGE_peak_5_at_APOL6_5end
|association_with_transcript=-202bp_to_NM_030641,uc003aod.2,uc003a...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80830 | |EntrezGene=80830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14870 | |HGNC=14870 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTP4,Q9BWW8 | |UniProt=B3KTP4,Q9BWW8 | ||
|association_with_transcript=-202bp_to_NM_030641,uc003aod.2,uc003aoe.2_5end | |||
|cluster_id=chr22:36044174..36044221,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_APOL6_5end | |||
|id=chr22:36044174..36044221,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.01e-11!18;CL:0000789!3.01e-11!18;CL:0002420!3.01e-11!18;CL:0002419!3.01e-11!18;CL:0000790!3.01e-11!18;CL:0000084!1.07e-10!25;CL:0000827!1.07e-10!25;CL:0000057!1.10e-08!75;CL:0002620!6.38e-08!23;CL:0000625!1.12e-07!11;CL:0000838!2.15e-07!52;CL:0000542!5.69e-07!53;CL:0000051!5.69e-07!53;CL:0000134!8.75e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.60e-20;18!CL:0000789;9.60e-20;18!CL:0002419;9.60e-20;18!CL:0000084;1.81e-14;25!CL:0000625;5.55e-13;11!CL:0000624;5.35e-10;6!CL:0002620;2.96e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.76e-20,18;CL:0000789,2.76e-20,18;CL:0002420,2.76e-20,18;CL:0002419,2.76e-20,18;CL:0000790,2.76e-20,18;CL:0000084,7.22e-15,25;CL:0000827,7.22e-15,25;CL:0000625,1.52e-13,11;CL:0000838,1.72e-11,52;CL:0000542,4.02e-11,53;CL:0000051,4.02e-11,53;CL:0002087,1.88e-10,115;CL:0000624,5.52e-10,6;CL:0000134,9.40e-10,354;CL:0002620,1.31e-09,23;CL:0002320,4.16e-09,361;CL:0000738,5.11e-09,136;CL:0000219,4.14e-08,386;CL:0002031,1.95e-07,120;CL:0000057,6.80e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000790;9.60e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.70e-07,5;DOID:450,7.70e-07,5;DOID:66,7.70e-07,5;DOID:423,7.70e-07,5;DOID:0080000,7.70e-07,5;DOID:11722,7.70e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.80e-10;15!UBERON:0000179;2.80e-10;15!UBERON:0000463;2.80e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.21e-10,15;UBERON:0000179,4.21e-10,15;UBERON:0000463,4.21e-10,15;UBERON:0002384,5.38e-09,371 | |||
|phase1_expression=1.63510541343501,0.642301571672949,2.11431606143957,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.29902789771517,1.72411237844886,1.41679406364623,5.11373559903575,25.332740274416,4.02521920621798,0,0.30120591877825,0.369754010166788,0.92960640696362,0.142169232487422,0,1.66198622559563,7.62068900386538,5.64228263861215,0,0.971680998056939,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,1.1507695692886,0.768482119587302,1.6553756092201,1.37898272294647,0.645484683583826,0,0.188242339542605,0,0,1.53041946185451,0.641858054152187,1.91801137739712,0.989553900560148,0,0.426224750532694,1.45104619314292,0.56738522469114,0.622822248995575,1.50749199154046,2.08593167368081,0.868755378820466,2.42159801053347,1.84138817993782,3.79754864929061,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,1.76171156811282,0,0,7.8471198817415,0,11.2124568964885,15.7204305099666,16.0369169219617,0.167186495390678,12.71096839871,8.99550830895993,7.79306913631645,2.67385096524417,17.3817485410154,9.30442357251209,12.4569777331907,1.5370958367081,1.56071217071854,0.822189523018381,1.93445012450094,1.44901542867526,3.55887751588945,2.67540828089713,2.09071047609954,2.15287751125376,5.74830740402882,6.8725489096526,8.34964983664359,1.91139248594458,1.30216690771284,1.90090408889675,1.6563263098555,2.68771883424279,2.49861453104692,2.36777252044017,1.64225599384209,18.9510338631248,23.5347372289486,15.9306844271079,0,0,0.12786256184353,1.80719576192283,0,1.44846518960824,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,1.01304409331664,0.397227542439656,1.72101972449288,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0.404132016209064,0.490385709340376,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.298897361103602,1.64408298101271,0.323745888736263,0.702254033511242,0.61246251376468,0.122834317311768,0,2.37600571456411,0.741800787835671,0,0.718618141816238,0.336672227908132,0,1.10825646193673,1.75591048352335,1.83892677479412,0.901428353439581,0.680593098960126,1.61450672119976,1.70845911054854,3.17897851739343,4.80145753735044,1.95799805553034,1.54584324027377,2.23340227597908,2.86919764810153,3.41029518064195,3.5340728394176,2.66944706062668,0.161646056818812,4.61512470271599,1.71278566986988,1.18692414617341,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0.402115889646523,0,0,1.03993478527958,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0,1.6798212819886,0.708875486211932,1.70161193135412,0.581267877027924,0.383382679165211,0.985326475791887,0.528290604079356,0.414656231081544,0,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0.600686115687835,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.112085143993527,20.4911990610004,37.087942875837,22.7167174215155,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,1.03985430765404,1.07057393278297,2.68094105557689,0.937131319941706,0,0,1.03473071292505,0,0,0.955719759148911,0,0.343143423810856,4.54889657470352,6.03999762292127,6.93729125722388,0,0,0.604780586659361,3.2254015016441,4.14347327877769,1.40330047216537,3.07533958213682,2.55853624533352,1.12597744800525,0,0.154209693802656,0.532685175939381,0.492762936082855,0.519254429183621,0.813472649219715,0,0.40101294060657,0.368323955743585,0.803701137152247,0.910455840033585,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,2.19766715564024,2.14524699793529,0,0.650060246036521,4.82051789532479,0,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.534192213880424,0.661139661443912,0,0.127612712494584,0.50578890427775,1.39453664789186,2.20368642781448,0,1.23213432070436,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,2.92456187557541,1.05650146756755,0.409499734223957,0.565621727814851,1.13008116620243,0,0,0.876901770507525,0,0,0.608731130888112,0.92947049429925,0,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0.987884678879706,0,0,0.865999014529609,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.689170200620878,0.507447609232169,0,1.13929437434833,1.90585420366231,1.23408681925858,1.29694662238543,1.08006287447623,1.5862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| ||
|short_description=p5@APOL6 | |||
}} | }} |
Latest revision as of 00:41, 20 September 2015
Short description: | p5@APOL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOL6_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -202bp_to_NM_030641, uc003aod.2, uc003aoe.2_5end |
EntrezGene: | APOL6 |
HGNC: | 14870 |
UniProt: | B3KTP4Q9BWW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.76e-20 | 18 |
alpha-beta T cell | 2.76e-20 | 18 |
immature T cell | 2.76e-20 | 18 |
mature T cell | 2.76e-20 | 18 |
immature alpha-beta T cell | 2.76e-20 | 18 |
T cell | 7.22e-15 | 25 |
pro-T cell | 7.22e-15 | 25 |
CD8-positive, alpha-beta T cell | 1.52e-13 | 11 |
lymphoid lineage restricted progenitor cell | 1.72e-11 | 52 |
lymphocyte | 4.02e-11 | 53 |
common lymphoid progenitor | 4.02e-11 | 53 |
nongranular leukocyte | 1.88e-10 | 115 |
CD4-positive, alpha-beta T cell | 5.52e-10 | 6 |
mesenchymal cell | 9.40e-10 | 354 |
skin fibroblast | 1.31e-09 | 23 |
connective tissue cell | 4.16e-09 | 361 |
leukocyte | 5.11e-09 | 136 |
motile cell | 4.14e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 1.95e-07 | 120 |
fibroblast | 6.80e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
blood | 4.21e-10 | 15 |
haemolymphatic fluid | 4.21e-10 | 15 |
organism substance | 4.21e-10 | 15 |
connective tissue | 5.38e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.70e-07 | 5 |
myotonic disease | 7.70e-07 | 5 |
muscle tissue disease | 7.70e-07 | 5 |
myopathy | 7.70e-07 | 5 |
muscular disease | 7.70e-07 | 5 |
myotonic dystrophy | 7.70e-07 | 5 |