FFCP PHASE1:Hg19::chr11:71900703..71900725,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:71900703..71900725,+ to FFCP PHASE1:Hg19::chr11:71900703..71900725,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2348 | |EntrezGene=2348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |HGNC=3791 | ||
|TSSclassifier=strong | |||
|UniProt=P15328 | |UniProt=P15328 | ||
|association_with_transcript=0bp_to_ENST00000393681_5end | |||
|cluster_id=chr11:71900703..71900725,+ | |||
|description=CAGE_peak_4_at_FOLR1_5end | |||
|id=chr11:71900703..71900725,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.59e-07!12;CL:1000494!1.59e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.06e-21;10!CL:1000494;2.06e-21;10!CL:1000497;5.22e-15;17!CL:0002518;5.22e-15;17!CL:1000449;1.06e-13;15!CL:0002541;4.75e-10;3!CL:0000239;1.22e-09;3!CL:1000615;1.22e-09;3!CL:0002306;1.22e-09;3!CL:0002681;4.36e-08;12!CL:0002584;4.36e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.87e-21,10;CL:1000494,1.87e-21,10;CL:1000497,4.95e-15,17;CL:0002518,4.95e-15,17;CL:1000449,9.95e-14,15;CL:0002541,4.61e-10,3;CL:0000239,1.20e-09,3;CL:1000615,1.20e-09,3;CL:0002306,1.20e-09,3;CL:0002681,4.28e-08,12;CL:0002584,4.28e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.39e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-13!115;UBERON:0000062!2.60e-12!511;UBERON:0005743!1.14e-11!86;UBERON:0001017!4.69e-11!82;UBERON:0001049!5.43e-11!57;UBERON:0005068!5.43e-11!57;UBERON:0006241!5.43e-11!57;UBERON:0007135!5.43e-11!57;UBERON:0000073!5.08e-10!94;UBERON:0001016!5.08e-10!94;UBERON:0000955!5.39e-10!69;UBERON:0006238!5.39e-10!69;UBERON:0000468!1.84e-08!659;UBERON:0003075!2.23e-08!86;UBERON:0007284!2.23e-08!86;UBERON:0002346!4.63e-08!90;UBERON:0000467!4.72e-08!625;UBERON:0002616!5.48e-08!59;UBERON:0000480!5.67e-08!626;UBERON:0003076!6.61e-08!15;UBERON:0003057!6.61e-08!15;UBERON:0000489!1.03e-07!32;UBERON:0009773!1.59e-07!12;UBERON:0001231!1.59e-07!12;UBERON:0004810!1.59e-07!12;UBERON:0000481!2.71e-07!347;UBERON:0005631!4.95e-07!14;UBERON:0000158!4.95e-07!14;UBERON:0002113!6.51e-07!27;UBERON:0003918!6.51e-07!27;UBERON:0005095!6.51e-07!27;UBERON:0007687!6.51e-07!27;UBERON:0000475!7.72e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.06e-21;10!UBERON:0009773;2.06e-21;10!UBERON:0001231;2.06e-21;10!UBERON:0004810;2.06e-21;10!UBERON:0002113;4.65e-15;24!UBERON:0011143;4.65e-15;24!UBERON:0006555;1.06e-13;15!UBERON:0004819;1.06e-13;15!UBERON:0001285;1.06e-13;15!UBERON:0007684;1.06e-13;15!UBERON:0000489;5.46e-12;29!UBERON:0006554;1.69e-11;30!UBERON:0001008;1.69e-11;30!UBERON:0001896;2.21e-10;3!UBERON:0005290;2.21e-10;3!UBERON:0003124;4.75e-10;3!UBERON:0000920;4.75e-10;3!UBERON:0006853;1.22e-09;3!UBERON:0007685;1.22e-09;3!UBERON:0004134;1.22e-09;3!UBERON:0001225;4.36e-08;12!UBERON:0008987;4.36e-08;12!UBERON:0005172;7.05e-07;52!UBERON:0005173;7.05e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.87e-21,10;UBERON:0002113,3.94e-16,26;UBERON:0003918,3.94e-16,26;UBERON:0011143,3.94e-16,26;UBERON:0005095,3.94e-16,26;UBERON:0007687,3.94e-16,26;UBERON:0006555,9.24e-16,16;UBERON:0004819,9.24e-16,16;UBERON:0004211,9.95e-14,15;UBERON:0009773,9.95e-14,15;UBERON:0001231,9.95e-14,15;UBERON:0001285,9.95e-14,15;UBERON:0007684,9.95e-14,15;UBERON:0004208,9.95e-14,15;UBERON:0000489,4.93e-13,31;UBERON:0006554,5.62e-12,47;UBERON:0001008,1.20e-11,48;UBERON:0003124,1.73e-10,7;UBERON:0001896,2.22e-10,3;UBERON:0005290,2.22e-10,3;UBERON:0010096,2.22e-10,3;UBERON:0000920,4.61e-10,3;UBERON:0005172,5.08e-10,54;UBERON:0005173,5.08e-10,54;UBERON:0006853,1.20e-09,3;UBERON:0007685,1.20e-09,3;UBERON:0004134,1.20e-09,3;UBERON:0002417,1.20e-08,60;UBERON:0000916,1.20e-08,60;UBERON:0001225,4.28e-08,12;UBERON:0008987,4.28e-08,12;UBERON:0005177,1.34e-07,101 | |||
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| ||
|short_description=p4@FOLR1 | |||
}} | }} |
Latest revision as of 00:43, 20 September 2015
Short description: | p4@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOLR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393681_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.87e-21 | 10 |
nephron tubule epithelial cell | 1.87e-21 | 10 |
kidney cell | 4.95e-15 | 17 |
kidney epithelial cell | 4.95e-15 | 17 |
epithelial cell of nephron | 9.95e-14 | 15 |
chorionic membrane mesenchymal stem cell | 4.61e-10 | 3 |
brush border epithelial cell | 1.20e-09 | 3 |
kidney cortex tubule cell | 1.20e-09 | 3 |
epithelial cell of proximal tubule | 1.20e-09 | 3 |
kidney cortical cell | 4.28e-08 | 12 |
renal cortical epithelial cell | 4.28e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.87e-21 | 10 |
kidney | 3.94e-16 | 26 |
kidney mesenchyme | 3.94e-16 | 26 |
upper urinary tract | 3.94e-16 | 26 |
kidney rudiment | 3.94e-16 | 26 |
kidney field | 3.94e-16 | 26 |
excretory tube | 9.24e-16 | 16 |
kidney epithelium | 9.24e-16 | 16 |
nephron epithelium | 9.95e-14 | 15 |
renal tubule | 9.95e-14 | 15 |
nephron tubule | 9.95e-14 | 15 |
nephron | 9.95e-14 | 15 |
uriniferous tubule | 9.95e-14 | 15 |
nephrogenic mesenchyme | 9.95e-14 | 15 |
cavitated compound organ | 4.93e-13 | 31 |
urinary system structure | 5.62e-12 | 47 |
renal system | 1.20e-11 | 48 |
chorion | 1.73e-10 | 7 |
medulla oblongata | 2.22e-10 | 3 |
myelencephalon | 2.22e-10 | 3 |
future myelencephalon | 2.22e-10 | 3 |
egg chorion | 4.61e-10 | 3 |
abdomen element | 5.08e-10 | 54 |
abdominal segment element | 5.08e-10 | 54 |
renal cortex tubule | 1.20e-09 | 3 |
region of nephron tubule | 1.20e-09 | 3 |
proximal tubule | 1.20e-09 | 3 |
abdominal segment of trunk | 1.20e-08 | 60 |
abdomen | 1.20e-08 | 60 |
cortex of kidney | 4.28e-08 | 12 |
renal parenchyma | 4.28e-08 | 12 |
trunk region element | 1.34e-07 | 101 |