FFCP PHASE1:Hg19::chr12:6745101..6745141,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6745101..6745141,-
|short_description=p1@LPAR5
|description=CAGE_peak_1_at_LPAR5_5end
|association_with_transcript=0bp_to_ENST00000540335_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57121 | |EntrezGene=57121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13307 | |HGNC=13307 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000540335_5end | |||
|cluster_id=chr12:6745101..6745141,- | |||
|description=CAGE_peak_1_at_LPAR5_5end | |||
|id=chr12:6745101..6745141,- | |||
|ontology_enrichment_celltype=CL:0000542!1.78e-13!53;CL:0000051!1.78e-13!53;CL:0000838!4.83e-13!52;CL:0000945!5.07e-11!24;CL:0000826!5.07e-11!24;CL:0000236!1.90e-10!14;CL:0000037!6.70e-10!172;CL:0000566!6.70e-10!172;CL:0002032!1.74e-09!165;CL:0000837!1.74e-09!165;CL:0000988!5.79e-08!182;CL:0000738!1.43e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.74e-12;24!CL:0000236;4.00e-11;13!CL:0000542;3.52e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.76e-15,53;CL:0000051,4.76e-15,53;CL:0000838,1.48e-14,52;CL:0000945,6.04e-12,24;CL:0000826,6.04e-12,24;CL:0000236,1.19e-11,14;CL:0000037,3.51e-08,168;CL:0002032,8.16e-08,161;CL:0000837,8.16e-08,161;CL:0000988,8.86e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.52e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.03e-27!115;UBERON:0001049!6.82e-08!57;UBERON:0005068!6.82e-08!57;UBERON:0006241!6.82e-08!57;UBERON:0007135!6.82e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.05e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-27,114;UBERON:0001049,5.06e-08,56;UBERON:0005068,5.06e-08,56;UBERON:0006241,5.06e-08,56;UBERON:0007135,5.06e-08,56;UBERON:0000073,4.26e-07,53;UBERON:0002616,4.26e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,3.48900583986214,27.960495632662,22.4201931494186,0,0,0,0,0,0,0,0,0,0,0,0,14.2893068748669,8.94896425004409,13.6169651672665,3.54027849164014,1.91914699048606,2.16742572642506,18.3884244895785,21.3856202332558,21.4457325896737,10.8454080812422,12.0843847614308,0,0,1.60435557976113,2.38711957787437,4.25439401055856,7.44955431843653,4.63636021741536,1.16318591023652,2.26725566213286,2.91100873425379,0.232429036905685,1.23350366406548,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0,1.60464513538047,0,0,0.598390972864896,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,7.87019353423379,0.368277635987565,0,0.422510572623884,0.425208599930087,0,0,0,0,0.285012743741249,0.59675003159727,0.730656615058536,56.3187982276233,47.5140591798054,39.1384071699964,40.9661013663847,44.4439545609974,37.9336610369959,42.3068718582312,38.1621501814146,42.1217597140992,26.4256735216922,32.4932243906445,0,1.68152568894461,2.10707267820062,3.540775862049,3.53709686474248,2.05601498999509,24.0748553362576,10.7554347989085,9.46895611469466,19.4826728407911,31.8633906691596,7.07054177939609,7.75368631042674,8.6657236404805,14.602410448727,16.1273590974249,1.97325485524411,2.21080014228679,5.21645554323094,2.66915813691709,4.54819407752512,3.1360657141493,7.59172596073693,1.91610246800961,3.4362744548263,3.54227568827304,7.64556994377832,9.11516835398986,9.50452044448374,8.13105643019973,9.85496905889022,16.240994451805,10.8917535940248,9.03240796613151,7.25784275609037,3.20928234940209,9.55841065626473,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,4.1913304159268,50.2727497843708,44.1233486913471,0,0,0.664789802594326,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,32.7070539106901,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,18.7463027568398,20.1832129237218,16.0610573417842,0.731842236777572,0.927708378250397,1.2781333715647,0.621966330092223,1.7662459561294,0.72995471815166,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.772057809126758,0.435758888184812,0.949082476444386,0.674156540800822,1.76599318612811,1.15424147083917,0,0,1.2347220339942,0,0,0,1.77236972004421,29.5780276607816,2.21379189377604,0,41.3758575990518,14.6122279234905,22.1163739305588,16.4807432382183,0,0,0,0,0.117408694235822,0,0,0,4.74122638775565,5.15091697256924,2.70838706696137,0.468008530278475,2.97262324577457,8.43604505880993,21.6696945376529,11.6255579738757,0.0895585227028483,0.290633938513962,0.766765358330422,44.8323546485309,77.7467672336786,87.4924647582058,73.2129363358164,153.132071746199,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.904318131178758,0,4.1988656296464,0,1.50677127429638,0,0,0,0,0,0,0,0.336255431980582,8.27529192848094,3.45004119775228,7.9572682493444,0,0,0,0.670065061337395,0.637938751653163,0,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85718499266972,5.60856922128404,7.36420148843766,8.79069957194152,26.6296703216795,13.0027826131763,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,4.81215528727884,10.1289087829486,0,0,0,4.51199612907412,0.462092022626489,1.56869953835371,0,0.73886140225013,0,0,0,0,0.270946437543853,1.00337954770971,0,0.831076008928724,0.447749509444357,1.97333888981341,1.0457418040996,0,0,0,2.67906630284078,0.183138929636687,0,16.653700601889,20.8019278731687,0,0,0,0,0,0,0,0.170453254832202,0,6.61139661443912,9.2251232335251,7.40153732468588,5.8671512896219,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,16.2615370506115,14.0763477862515,14.1558280319719,2.16530741786592,33.5794190683559,28.6401508634963,55.4287691920845,27.1073612244212,12.6861902308042,17.5866557642746,14.2411796793541,16.914456057503,20.1567513812235,15.5633594686252,11.8806916192385,16.6556287021797,0,0,10.5367292871844,13.5636317841775,20.3419590296787,21.4136948478726,3.50737800003409,23.7499452005052,0,0.635020748171649,0.324621940274555,0.280797178113459,3.19528550646469,0.313359791546046,0,0,2.24823305145179,1.61439765752838,0.425846237690326,0.343505344755765,0,0,0,0,46.7722372144007,6.15436994738562,1.89318974933188,1.6653598399891,5.63948020351398,52.2122107738933,4.68826173670061,0,0,0,6.92359005739301,7.12715233998333,11.9792673818701,1.9882952955326,13.3635945589987,0,0,0,5.37969568277888,27.3521076375836,0,0.102268682502155,2.21552649829925,0,15.6370930996349,0,0,6.41182136640068,11.974154617347,0,7.75466196876175,6.21546257684403,0,2.08342208868187,0,3.62499787717397,7.96554137998498,1.01701460117107,1.18193840883968,0.689486746482929,0,0,6.20018970069687,6.99459344027366,1.52581736317083,2.32216445855572,3.25102380848902,3.51016635446356,0,23.562612783084,8.387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| ||
|short_description=p1@LPAR5 | |||
}} | }} |
Latest revision as of 00:59, 20 September 2015
Short description: | p1@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPAR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540335_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.76e-15 | 53 |
common lymphoid progenitor | 4.76e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.48e-14 | 52 |
lymphocyte of B lineage | 6.04e-12 | 24 |
pro-B cell | 6.04e-12 | 24 |
B cell | 1.19e-11 | 14 |
hematopoietic stem cell | 3.51e-08 | 168 |
hematopoietic oligopotent progenitor cell | 8.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.16e-08 | 161 |
hematopoietic cell | 8.86e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-27 | 114 |
neural tube | 5.06e-08 | 56 |
neural rod | 5.06e-08 | 56 |
future spinal cord | 5.06e-08 | 56 |
neural keel | 5.06e-08 | 56 |
regional part of nervous system | 4.26e-07 | 53 |
regional part of brain | 4.26e-07 | 53 |