FFCP PHASE1:Hg19::chr1:204380954..204380965,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:204380954..204380965,- to FFCP PHASE1:Hg19::chr1:204380954..204380965,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84919 | |EntrezGene=84919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14951 | |HGNC=14951 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5C9 | |UniProt=F5H5C9 | ||
|association_with_transcript=-9bp_to_ENST00000543650_5end | |||
|cluster_id=chr1:204380954..204380965,- | |||
|description=CAGE_peak_4_at_PPP1R15B_5end | |||
|id=chr1:204380954..204380965,- | |||
|ontology_enrichment_celltype=CL:0000738!1.44e-18!140;CL:0002031!5.29e-17!124;CL:0000988!5.96e-17!182;CL:0000037!9.29e-17!172;CL:0000566!9.29e-17!172;CL:0002032!3.03e-16!165;CL:0000837!3.03e-16!165;CL:0002087!5.08e-15!119;CL:0000860!2.44e-13!45;CL:0002057!3.84e-13!42;CL:0000766!4.81e-13!76;CL:0000839!5.77e-12!70;CL:0000763!1.27e-11!112;CL:0000049!1.27e-11!112;CL:0000557!1.33e-11!71;CL:0002009!1.12e-10!65;CL:0002194!7.01e-10!63;CL:0000576!7.01e-10!63;CL:0000040!7.01e-10!63;CL:0000559!7.01e-10!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-13;33!CL:0002057;2.21e-13;33!CL:0000473;4.96e-09;39!CL:0000234;4.96e-09;39!CL:0000576;5.76e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.40e-18,136;CL:0000988,8.92e-18,177;CL:0002031,2.96e-17,120;CL:0000037,4.47e-17,168;CL:0002032,1.69e-16,161;CL:0000837,1.69e-16,161;CL:0002087,5.57e-15,115;CL:0000860,1.61e-13,42;CL:0002057,1.61e-13,42;CL:0000766,1.83e-13,72;CL:0000839,3.02e-12,66;CL:0000557,4.68e-12,67;CL:0000763,4.81e-12,108;CL:0000049,4.81e-12,108;CL:0002009,6.96e-11,61;CL:0000473,2.15e-10,48;CL:0000234,2.15e-10,48;CL:0002194,4.88e-10,59;CL:0000576,4.88e-10,59;CL:0000040,4.88e-10,59;CL:0000559,4.88e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.17e-12!102;UBERON:0003061!4.17e-12!102;UBERON:0001474!6.10e-10!86;UBERON:0002193!1.10e-09!112;UBERON:0002371!2.40e-09!80;UBERON:0004765!3.63e-08!101;UBERON:0001434!3.63e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.36e-13,98;UBERON:0003061,7.36e-13,98;UBERON:0002193,1.82e-10,108;UBERON:0001474,3.68e-10,82;UBERON:0002371,1.34e-09,76;UBERON:0004765,2.67e-08,90;UBERON:0002405,3.28e-08,93;UBERON:0001434,1.02e-07,100 | |||
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| ||
|short_description=p4@PPP1R15B | |||
}} | }} |
Latest revision as of 01:03, 20 September 2015
Short description: | p4@PPP1R15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PPP1R15B_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000543650_5end |
EntrezGene: | PPP1R15B |
HGNC: | 14951 |
UniProt: | F5H5C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.40e-18 | 136 |
hematopoietic cell | 8.92e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 2.96e-17 | 120 |
hematopoietic stem cell | 4.47e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.69e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-16 | 161 |
nongranular leukocyte | 5.57e-15 | 115 |
classical monocyte | 1.61e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-13 | 42 |
myeloid leukocyte | 1.83e-13 | 72 |
myeloid lineage restricted progenitor cell | 3.02e-12 | 66 |
granulocyte monocyte progenitor cell | 4.68e-12 | 67 |
myeloid cell | 4.81e-12 | 108 |
common myeloid progenitor | 4.81e-12 | 108 |
macrophage dendritic cell progenitor | 6.96e-11 | 61 |
defensive cell | 2.15e-10 | 48 |
phagocyte | 2.15e-10 | 48 |
monopoietic cell | 4.88e-10 | 59 |
monocyte | 4.88e-10 | 59 |
monoblast | 4.88e-10 | 59 |
promonocyte | 4.88e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.36e-13 | 98 |
blood island | 7.36e-13 | 98 |
hemolymphoid system | 1.82e-10 | 108 |
bone element | 3.68e-10 | 82 |
bone marrow | 1.34e-09 | 76 |
skeletal element | 2.67e-08 | 90 |
immune system | 3.28e-08 | 93 |
skeletal system | 1.02e-07 | 100 |