FFCP PHASE1:Hg19::chr9:110252074..110252079,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:110252074..110252079,-
|short_description=p3@KLF4
|description=CAGE_peak_3_at_KLF4_5end
|association_with_transcript=-24bp_to_ENST00000439281_5end
|Entrez...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9314 | |EntrezGene=9314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |HGNC=6348 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZBT1 | |UniProt=B7ZBT1 | ||
|association_with_transcript=-24bp_to_ENST00000439281_5end | |||
|cluster_id=chr9:110252074..110252079,- | |||
|description=CAGE_peak_3_at_KLF4_5end | |||
|id=chr9:110252074..110252079,- | |||
|ontology_enrichment_celltype=CL:0002057!2.40e-21!42;CL:0000860!1.33e-20!45;CL:0000557!1.40e-15!71;CL:0002009!8.18e-15!65;CL:0002194!8.93e-14!63;CL:0000576!8.93e-14!63;CL:0000040!8.93e-14!63;CL:0000559!8.93e-14!63;CL:0000766!2.68e-13!76;CL:0000839!1.13e-12!70;CL:0002393!1.97e-07!9;CL:0002397!1.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.89e-17;33!CL:0002057;3.89e-17;33!CL:0000576;1.03e-13;48!CL:0000473;1.79e-12;39!CL:0000234;1.79e-12;39!CL:0000766;7.71e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.55e-27,42;CL:0002057,6.55e-27,42;CL:0000473,3.64e-23,48;CL:0000234,3.64e-23,48;CL:0000557,2.33e-21,67;CL:0002009,1.04e-19,61;CL:0000766,1.96e-18,72;CL:0002194,2.50e-18,59;CL:0000576,2.50e-18,59;CL:0000040,2.50e-18,59;CL:0000559,2.50e-18,59;CL:0000839,5.17e-18,66;CL:0000738,2.15e-10,136;CL:0000763,5.24e-10,108;CL:0000049,5.24e-10,108;CL:0002393,4.39e-09,9;CL:0002397,4.39e-09,9;CL:0002031,1.02e-07,120;CL:0002087,1.89e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.80e-15!86;UBERON:0002371!2.63e-15!80;UBERON:0004765!4.98e-14!101;UBERON:0001434!4.98e-14!101;UBERON:0002390!4.08e-13!102;UBERON:0003061!4.08e-13!102;UBERON:0002193!3.11e-11!112;UBERON:0000062!1.78e-08!511;UBERON:0002405!7.47e-08!115;UBERON:0000926!2.20e-07!448;UBERON:0004120!2.20e-07!448;UBERON:0006603!2.20e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-21,76;UBERON:0001474,6.09e-21,82;UBERON:0002390,8.48e-18,98;UBERON:0003061,8.48e-18,98;UBERON:0004765,1.01e-17,90;UBERON:0001434,2.96e-17,100;UBERON:0002405,2.09e-16,93;UBERON:0002193,7.09e-16,108 | |||
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| ||
|short_description=p3@KLF4 | |||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p3@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000439281_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | B7ZBT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.55e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-27 | 42 |
defensive cell | 3.64e-23 | 48 |
phagocyte | 3.64e-23 | 48 |
granulocyte monocyte progenitor cell | 2.33e-21 | 67 |
macrophage dendritic cell progenitor | 1.04e-19 | 61 |
myeloid leukocyte | 1.96e-18 | 72 |
monopoietic cell | 2.50e-18 | 59 |
monocyte | 2.50e-18 | 59 |
monoblast | 2.50e-18 | 59 |
promonocyte | 2.50e-18 | 59 |
myeloid lineage restricted progenitor cell | 5.17e-18 | 66 |
leukocyte | 2.15e-10 | 136 |
myeloid cell | 5.24e-10 | 108 |
common myeloid progenitor | 5.24e-10 | 108 |
intermediate monocyte | 4.39e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.39e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 1.02e-07 | 120 |
nongranular leukocyte | 1.89e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-21 | 76 |
bone element | 6.09e-21 | 82 |
hematopoietic system | 8.48e-18 | 98 |
blood island | 8.48e-18 | 98 |
skeletal element | 1.01e-17 | 90 |
skeletal system | 2.96e-17 | 100 |
immune system | 2.09e-16 | 93 |
hemolymphoid system | 7.09e-16 | 108 |