FFCP PHASE1:Hg19::chr9:110252074..110252079,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZBT1 | |||
|association_with_transcript=-24bp_to_ENST00000439281_5end | |||
|cluster_id=chr9:110252074..110252079,- | |||
|description=CAGE_peak_3_at_KLF4_5end | |||
|id=chr9:110252074..110252079,- | |||
|ontology_enrichment_celltype=CL:0002057!2.40e-21!42;CL:0000860!1.33e-20!45;CL:0000557!1.40e-15!71;CL:0002009!8.18e-15!65;CL:0002194!8.93e-14!63;CL:0000576!8.93e-14!63;CL:0000040!8.93e-14!63;CL:0000559!8.93e-14!63;CL:0000766!2.68e-13!76;CL:0000839!1.13e-12!70;CL:0002393!1.97e-07!9;CL:0002397!1.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.89e-17;33!CL:0002057;3.89e-17;33!CL:0000576;1.03e-13;48!CL:0000473;1.79e-12;39!CL:0000234;1.79e-12;39!CL:0000766;7.71e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.55e-27,42;CL:0002057,6.55e-27,42;CL:0000473,3.64e-23,48;CL:0000234,3.64e-23,48;CL:0000557,2.33e-21,67;CL:0002009,1.04e-19,61;CL:0000766,1.96e-18,72;CL:0002194,2.50e-18,59;CL:0000576,2.50e-18,59;CL:0000040,2.50e-18,59;CL:0000559,2.50e-18,59;CL:0000839,5.17e-18,66;CL:0000738,2.15e-10,136;CL:0000763,5.24e-10,108;CL:0000049,5.24e-10,108;CL:0002393,4.39e-09,9;CL:0002397,4.39e-09,9;CL:0002031,1.02e-07,120;CL:0002087,1.89e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.80e-15!86;UBERON:0002371!2.63e-15!80;UBERON:0004765!4.98e-14!101;UBERON:0001434!4.98e-14!101;UBERON:0002390!4.08e-13!102;UBERON:0003061!4.08e-13!102;UBERON:0002193!3.11e-11!112;UBERON:0000062!1.78e-08!511;UBERON:0002405!7.47e-08!115;UBERON:0000926!2.20e-07!448;UBERON:0004120!2.20e-07!448;UBERON:0006603!2.20e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-21,76;UBERON:0001474,6.09e-21,82;UBERON:0002390,8.48e-18,98;UBERON:0003061,8.48e-18,98;UBERON:0004765,1.01e-17,90;UBERON:0001434,2.96e-17,100;UBERON:0002405,2.09e-16,93;UBERON:0002193,7.09e-16,108 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,0,1.34088328328186,0,0,0,1.04474251279935,0,0.697801167972428,2.18441372130172,2.63766978228454,0.990130823680373,0.331397375727916,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,24.388585164632,13.0501995353052,15.1719800849754,2.75826367343678,1.204823675113,0.739508020333575,0,0,3.81680571135301,5.53995408531877,14.6397446653203,15.1907609501096,0,0.971680998056939,0.257575567634187,1.59938062657521,2.26725566213286,3.15359279544161,2.32429036905685,2.46700732813095,4.95530193432166,4.02769349251011,5.63553554364021,4.96612682766029,5.5159308917859,8.39130088658974,9.47985406160392,2.25890807451126,2.18324920046277,2.47195832889593,1.83650335422542,1.60464513538047,6.39337125799041,3.62836430205388,4.3882004676759,5.96714650745772,1.7412554317715,1.70215567407342,3.73693349397345,5.52747063564835,8.86520961314342,6.08128765174327,3.02699751316684,4.05105399586321,1.89877432464531,14.576614755524,13.3940708977977,11.9505427939774,9.77259090974507,12.3145052130035,12.6973213490693,10.8304842621674,12.3328339863436,10.0465284570549,1.75996244461323,0,0,1.28019066769952,0.400395987036012,0,0.661044872784862,0,13.0918982895173,2.93618594685469,17.2022952656353,1.32171328579026,2.24203425192614,1.84368859342554,0.786839080455332,1.17903228824749,1.85041349099558,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0.289803085735052,0,0.535081656179426,0,0.113309342697566,1.53288197440768,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0.201606743224732,0,1.01377082717959,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,1.5905718941022,3.89307896242109,0,0,0.263504357079378,2.48860243445654,2.91436230634034,2.22470665670658,1.62273696827342,0,0.664789802594326,7.15471872916026,4.57595928624102,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,2.61656431285521,0.993943903390637,0.633152558322899,0.397227542439656,0.860509862246441,1.06400514659507,0.560677600142307,0,0.49333509683432,0.311211035399766,0.67355336034844,0,0.151357427644931,0,1.40592859100278,1.24864030732128,0.570471821544449,1.94283284717341,1.64408298101271,0.971237666208789,0.280901613404497,0.204154171254893,1.84251475967652,2.58314452939414,3.56400857184616,2.22540236350701,0,3.59309070908119,0.505008341862199,2.50237039743928,0.554128230968366,0,1.83892677479412,1.20190447125277,0.680593098960126,1.07633781413317,0.640672166455702,0.635795703478686,1.50045548042201,0.412210116953756,2.06112432036503,0.18611685633159,0,0.389748020644795,0.504867548488229,0.644349290496095,2.90962902273861,0.710019185033229,0.302256294682921,0.169560592310488,0,0.545492241181669,0.573609190778008,0.609868530647977,1.72288698817931,0.464775771478074,0.725627385107593,1.00928340350251,0,0,0,1.38134921352481,0,2.16563844500876,0.354920400119532,0.505754070234305,0.964044119533928,1.32352767278873,0.871517776369625,0.949082476444386,0.539325232640658,0.784885860501384,0,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0,0,0,0.768251997860379,3.37205259772859,0.502644862058154,1.48141512253647,1.95484983186195,0,1.44331342025273,0,0.117408694235822,0.577465791044295,1.38895653772983,0.570762456703795,2.37061319387782,5.15091697256924,0.738651018262192,0.234004265139238,0.297262324577456,0,0.671928512795438,0.425325291727159,2.23896306757121,2.90633938513962,3.06706143332169,0,0,14.0983118567725,13.9796354814453,8.45824303956746,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.560655421726804,0,1.0267360014933,0.904902010304444,0,0,0,1.04007436911366,0,1.41849132023278,0.532844358032199,0.714889968290738,0.542621605391443,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.199945982364114,2.43247561282381,1.00451418286425,0,0.958499421966331,0,0,0.579125226670317,0.821905290201534,0.358121926479791,0,0.591092280605782,1.94064817373566,3.20857590699371,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0.414415513436035,0.12269149171914,0,2.17012018959788,1.24782516918484,1.78428988797162,1.10391690523754,1.28855556491985,2.10662269809403,6.82222512167955,3.10419213877515,0.664225598535437,0.737476674166813,2.17209036170207,0,1.02943027143257,2.89475236572042,9.05999643438191,6.19019835259977,3.33440328590885,4.99306318531491,1.5119514666484,1.48864684691266,2.30192959932094,1.40330047216537,1.53766979106841,0,1.28683136914886,1.48418066444991,0.462629081407967,0.532685175939381,1.39616165223476,1.55776328755086,0.929683027679674,0.362578348774867,1.20303882181971,4.14364450211533,0.918515585316854,0.910455840033585,0.393373244878272,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,1.30151357865721,0.9273691048295,1.92295876118521,0.82509499920588,0.574265537996172,3.25030123018261,1.6068392984416,1.16004861950546,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,0.712256285173899,1.15699440752685,3.2672311452068,1.02090169995667,3.74283789165535,0.929691098594572,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0,0.511795582622668,1.28381696410176,0.95460974377781,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0.974853958525138,0,0,0.848432591722276,0,1.65409603063837,1.32687795048244,0.438450885253763,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0.286822704408103,0.294747123039363,0,0.354761064070598,3.16661452946496,3.95153871551882,0,2.0996083214699,1.25088746543166,2.01090682660736,1.08890984861323,1.69458841398202,1.29151611801369,0,2.21715076768338,0.459446800413919,0.507447609232169,0,1.13929437434833,0.238231775457789,2.05681136543097,0,1.62009431171434,0,0.106824071127473,3.84991942105343,3.18552280775341,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.642352300414798,0.403599414382095,2.55507742614196,0,0,0.223676107892416,1.66849141711908,0.586164286206121,0,0,0,0,0,1.49712432326576,3.22317994398167,0,0,0.284136146806413,9.31103490476991,1.48482340416319,13.5150708923662,0,0.562677665642051,0.556543525114529,0,0.422250816255987,2.39097585901284,1.10513566212459,0,0,0,0.933118762985422,0.808815160325942,0.358042349351218,0,2.56472854656027,4.7896618469388,1.11136990144637,0,0.0927680981618513,0,2.08342208868187,0.874599999961957,4.34999745260876,0.1137934482855,1.77977555204936,1.41832609060762,0,0.291604613383254,1.04174996959975,0,0.120596438625408,0,0.110579259931225,0.591095237907095,1.31631238292384,4.13966161372163,5.01925479402972,2.00070672109872,0.227884111694002,1.38338342632836,0.897576444097721,0.217294743844016,8.29403015302991,0.915975934018623,2.13213910407454,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.843992258112108,0.652931232636591,0,0,0.995261931078505,1.06149077404007,1.22206028986725,0.889563386041866,0.494255755786011,0.313265848516366,0.539209063845416,3.21031058919516,0.234264445725339,0,0.782658475728359,1.21390189767046,0,0,0,3.60163503882381,4.81034942126376,0.72581733978073,7.31119259977904,3.30991955875499,5.02292669451561,3.58417289318877,0,0.693373365065693,0.520679215005393,3.23374911467446,1.56706571844725,1.92199335066233,0.343972064943233,1.06431964417994,2.19267951258557,0.0821154570532092,3.68558262655994,3.35373281427701,1.35588444468319,0,0,0.126621591911757,0.782205530939212,0.480952921509202,2.34798294213288,4.99524023955326,1.00863292007874,0,1.54435498075768,5.76219191952599,1.61528296235062,1.41416420770077,0,0.104602846312333,0.305994652908965,0.288950589901519,1.20084057741958,0.136905378891993,16.6070564487064,0.859530882839914,0.262887354279314,3.90995361781156,1.14580212005842,1.43574604915363,0.998395002494955,1.28767814440971,1.78537165953498,1.00775208730089,0,1.16495949527454,0,0,0,0.78741985211799,0,0,0.408610218334727,0.482259445395058,0.825236619583403,0.83088067605837,5.84932118033901,12.3808312729272,0.121499113316049,3.01891218839339,0.394028536495991,0.577000469484979,0.844802692155252,4.30289614398828,4.60596473566669,0,1.98627591109629,0,1.62899880526114,0,1.95952416065645,1.19730191562487,0.328370082997356,0.340776043570843,0.679872549120754,0.146552233678082,0,0.517131825446202,0,0.684347351537318,0.704815022316672,3.31040978959853,1.72924735609633,4.14239055347196,0,0,0,4.46838880439127,11.9683916741284,7.0193170326356,9.80305845643077,10.1640515520039,2.04170325125305,0,0,0.1251909307065,0,0.998361463831671,0.434674820589684,1.52183498429854,0,1.06154382279153,1.42732666772484,1.88212655758537,0.468334905806882,0.869526171664951,1.79105763464249,2.33713309847224,3.32883516901568,1.51522404220071,1.50940741051545,2.66943366478961,2.05956061557231,4.08323494160745,1.39893480524502,0.147855149989634,0.318593534327405,0,0.776314784381297,3.31764966272684,0.797525143673985,0,0.300515217994437,0.380805212168795,0,1.27294061441792,2.36303225493475,3.71227007902795,0.398095888698616,0.800055529326307,1.37358282073117,2.02049693259551,2.52369796457302,1.15571898244382,0.214441591374926,0.521988583930423,0.226705925512272,0.694567422971502,1.46842022703881,0.71635536432595,1.54400723580486,0.219284049578707,0.353378291891762,0.192914038270915,0.506827321959218,0.256241518587947,0,0.607719912354764,0.276516872303462,1.36402216187572,2.39156712564054,2.45348091383766,1.31043939538565,0.737318726261158,2.53574548030352,0,0.320075189082423,0,0.567515953566836,1.65695355226657,2.23807212351111,3.73246356019784,0,0,0.157265941855896,0.109209638192014,0,0,0.371807292777007,0.558644917973244,2.22603045457393,0,0,5.99549104274163,0.3062454773532,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,4.02405645854205,1.88751557356385,2.93485757634686,1.5018336599544,1.1441462864015,0,0.397832444232549,1.72983755203292,0.20170506870352,0.781514011233092,0.261906694481422,1.63771917510097,1.77427303460454,0,0.781078098613847,0.413373593002368,0.19024743058172,0,0.548257766857182,0.992422356778588,0.175871244359621,0.894336993477167,0,0,0.606965604236632,0,2.21755925406597,0,0.857440047187092,0.135939465953663,0.0657727735628491,0.709163045303809,0.667388411352415,1.0989032999072,0.157115589916002,1.68163297988273,0,0.431855182437243,0.9555033757741,1.00067161847319,0,0,0.173858272302579,1.60342272946051,1.03608082081518,6.1458651753822,4.14755797088455,0.430227358820278,0,0,1.27016115057279,6.64409918777745,1.86123831398592,0.955538938977433,0.223710863595585,2.45375584038107,0.121917924982269,0.647428837187895,2.05325613712494,1.1598144313382,5.34282092365053,0.935757853848423,0.795803100645473,0.475680363110274,2.93659813301296,0.329821550236287,0.754814217833368,1.54348316215889,0.874238242015829,9.87666322359198,1.71603825227734,0.942706188406504,0.785233868459781,0.594092800654172,1.2679671827502,1.35941691750254,0.751871343838829,1.09578409555081,0,0.535661815816973,3.88184358887261,2.64796510074255,6.57302749421866,0.917458566809082,0.143339583151451,0.473314686579554,0.271965960763659,0,2.645134202577,0.743990036333503,1.84870251452567,6.05677186973305,0,1.85751472338282,0,2.14176542458162,1.3360870263278,4.22716537860287,3.0084904715085,3.63737751447549,5.09131847296739,0.829169439458779,0.103432995861895,3.41174371041569,2.61870874610114,0,0.558672428662721,1.23345048838675,0.763765899337979,0.808468755832877,4.35433495793923,4.10679961302337,1.95320953742304,1.5061663132462,2.66128285236811,0.732629417498771,1.49418284228802,9.653614114347,1.07790242527904,0,1.34465588601153,1.22068853494722,0,1.40891655513718,0 | |||
|short_description=p3@KLF4 | |||
}} |
Latest revision as of 01:06, 20 September 2015
Short description: | p3@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000439281_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | B7ZBT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.55e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-27 | 42 |
defensive cell | 3.64e-23 | 48 |
phagocyte | 3.64e-23 | 48 |
granulocyte monocyte progenitor cell | 2.33e-21 | 67 |
macrophage dendritic cell progenitor | 1.04e-19 | 61 |
myeloid leukocyte | 1.96e-18 | 72 |
monopoietic cell | 2.50e-18 | 59 |
monocyte | 2.50e-18 | 59 |
monoblast | 2.50e-18 | 59 |
promonocyte | 2.50e-18 | 59 |
myeloid lineage restricted progenitor cell | 5.17e-18 | 66 |
leukocyte | 2.15e-10 | 136 |
myeloid cell | 5.24e-10 | 108 |
common myeloid progenitor | 5.24e-10 | 108 |
intermediate monocyte | 4.39e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.39e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 1.02e-07 | 120 |
nongranular leukocyte | 1.89e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-21 | 76 |
bone element | 6.09e-21 | 82 |
hematopoietic system | 8.48e-18 | 98 |
blood island | 8.48e-18 | 98 |
skeletal element | 1.01e-17 | 90 |
skeletal system | 2.96e-17 | 100 |
immune system | 2.09e-16 | 93 |
hemolymphoid system | 7.09e-16 | 108 |