FFCP PHASE1:Hg19::chr11:72295793..72295812,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5138 | |EntrezGene=5138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8777 | |HGNC=8777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-276bp_to_ENST00000441209_5end | |association_with_transcript=-276bp_to_ENST00000441209_5end | ||
|cluster_id=chr11:72295793..72295812,- | |||
|description=CAGE_peak_9_at_PDE2A_5end | |description=CAGE_peak_9_at_PDE2A_5end | ||
|id=chr11:72295793..72295812,- | |id=chr11:72295793..72295812,- | ||
|ontology_enrichment_celltype=CL:0002322!1.51e-09!5;CL:0000055!1.59e-07!180;CL:0000144!5.87e-07!625 | |ontology_enrichment_celltype=CL:0002322!1.51e-09!5;CL:0000055!1.59e-07!180;CL:0000144!5.87e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.74e-49;5!CL:0000317;2.54e-31;2!CL:1000448;2.54e-31;2!CL:0002308;2.54e-31;2!CL:0002140;2.54e-31;2!CL:0002321;1.48e-16;15!CL:0000148;2.44e-14;10!CL:0000622;3.65e-13;5!CL:0000154;3.95e-11;6!CL:0000147;2.03e-10;14!CL:0002077;1.02e-09;34!CL:0002535;3.43e-09;2!CL:0002554;5.93e-09;2!CL:0002600;5.93e-09;2!CL:0000150;1.02e-07;9!CL:0000362;1.02e-07;9!CL:0000710;1.85e-07;20 | |ontology_enrichment_celltype_v019=CL:0002322;9.74e-49;5!CL:0000317;2.54e-31;2!CL:1000448;2.54e-31;2!CL:0002308;2.54e-31;2!CL:0002140;2.54e-31;2!CL:0002321;1.48e-16;15!CL:0000148;2.44e-14;10!CL:0000622;3.65e-13;5!CL:0000154;3.95e-11;6!CL:0000147;2.03e-10;14!CL:0002077;1.02e-09;34!CL:0002535;3.43e-09;2!CL:0002554;5.93e-09;2!CL:0002600;5.93e-09;2!CL:0000150;1.02e-07;9!CL:0000362;1.02e-07;9!CL:0000710;1.85e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.25e-48,5;CL:0000317,4.04e-31,2;CL:1000448,4.04e-31,2;CL:0002308,4.04e-31,2;CL:0002140,4.04e-31,2;CL:0000148,1.61e-14,10;CL:0000541,1.61e-14,10;CL:0000622,4.39e-13,5;CL:0002077,2.74e-11,34;CL:0000154,4.60e-11,6;CL:0000147,1.52e-10,14;CL:0002535,3.43e-09,2;CL:0002554,4.70e-09,2;CL:0002600,6.94e-09,2;CL:0000150,1.13e-07,9;CL:0000362,1.13e-07,9;CL:0000710,1.52e-07,20;CL:0000221,3.27e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.54e-31;2!UBERON:0007771;2.54e-31;2!UBERON:0003297;2.54e-31;2!UBERON:0001821;2.54e-31;2!UBERON:0003487;2.54e-31;2!UBERON:0001820;2.54e-31;2!UBERON:0003126;8.71e-10;7!UBERON:0001005;8.71e-10;7!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;2.54e-31;2!UBERON:0007771;2.54e-31;2!UBERON:0003297;2.54e-31;2!UBERON:0001821;2.54e-31;2!UBERON:0003487;2.54e-31;2!UBERON:0001820;2.54e-31;2!UBERON:0003126;8.71e-10;7!UBERON:0001005;8.71e-10;7!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.04e-31,2;UBERON:0007771,4.04e-31,2;UBERON:0003297,4.04e-31,2;UBERON:0001821,4.04e-31,2;UBERON:0003487,4.04e-31,2;UBERON:0001820,4.04e-31,2;UBERON:0005089,4.04e-31,2;UBERON:0005088,4.04e-31,2;UBERON:0003126,9.52e-10,7;UBERON:0001005,9.52e-10,7;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,1.09776335516636,1.19276791489337,1.62671520017326,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0,0,0,1.14853107599234,1.30012049207304,0,0.870036464629098,0,0,0.137836572484531,0.429680979473094,0,0.0852266274161009,0,0.661139661443912,1.15314040419064,0.382838137483752,0.910420027699949,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.48111056362756,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13413143689449,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,1.37539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,1.09776335516636,1.19276791489337,1.62671520017326,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0,0,0,1.14853107599234,1.30012049207304,0,0.870036464629098,0,0,0.137836572484531,0.429680979473094,0,0.0852266274161009,0,0.661139661443912,1.15314040419064,0.382838137483752,0.910420027699949,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.48111056362756,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13413143689449,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,1.37539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p9@PDE2A | |short_description=p9@PDE2A | ||
}} | }} |
Latest revision as of 01:11, 20 September 2015
Short description: | p9@PDE2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -276bp_to_ENST00000441209_5end |
EntrezGene: | PDE2A |
HGNC: | 8777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.25e-48 | 5 |
sebum secreting cell | 4.04e-31 | 2 |
epithelial cell of sweat gland | 4.04e-31 | 2 |
epithelial cell of skin gland | 4.04e-31 | 2 |
acinar cell of sebaceous gland | 4.04e-31 | 2 |
melanocyte | 1.61e-14 | 10 |
melanoblast | 1.61e-14 | 10 |
acinar cell | 4.39e-13 | 5 |
ecto-epithelial cell | 2.74e-11 | 34 |
protein secreting cell | 4.60e-11 | 6 |
pigment cell | 1.52e-10 | 14 |
epithelial cell of cervix | 3.43e-09 | 2 |
fibroblast of lymphatic vessel | 4.70e-09 | 2 |
smooth muscle cell of trachea | 6.94e-09 | 2 |
glandular epithelial cell | 1.13e-07 | 9 |
epidermal cell | 1.13e-07 | 9 |
neurecto-epithelial cell | 1.52e-07 | 20 |
ectodermal cell | 3.27e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.04e-31 | 2 |
epidermis gland | 4.04e-31 | 2 |
gland of integumental system | 4.04e-31 | 2 |
sebaceous gland | 4.04e-31 | 2 |
skin sebaceous gland | 4.04e-31 | 2 |
sweat gland | 4.04e-31 | 2 |
sweat gland placode | 4.04e-31 | 2 |
sebaceous gland placode | 4.04e-31 | 2 |
trachea | 9.52e-10 | 7 |
respiratory airway | 9.52e-10 | 7 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |