FFCP PHASE1:Hg19::chr19:55888186..55888199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147744 | |EntrezGene=147744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29632 | |HGNC=29632 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZ59 | |UniProt=Q8WZ59 | ||
|association_with_transcript=-4bp_to_ENST00000291934,NM_139172,uc002qkt.1_5end | |||
|cluster_id=chr19:55888186..55888199,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_TMEM190_5end | |||
|id=chr19:55888186..55888199,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.23e-14!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.75e-12;1!UBERON:0009117;9.54e-11;10!UBERON:0005564;9.54e-11;10!UBERON:0008947;1.32e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.99e-09!69;UBERON:0006238!4.99e-09!69;UBERON:0001017!7.85e-09!82;UBERON:0005743!3.31e-08!86;UBERON:0007023!5.81e-08!115;UBERON:0003127!2.24e-07!2;UBERON:0000153!2.36e-07!129;UBERON:0007811!2.36e-07!129;UBERON:0003296!3.46e-07!4;UBERON:0010133!3.46e-07!4;UBERON:0000341!3.60e-07!2;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57;UBERON:0000073!5.29e-07!94;UBERON:0001016!5.29e-07!94;UBERON:0000007!5.42e-07!2;UBERON:0002616!9.57e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;8.98e-24;2!UBERON:0000341;6.47e-23;2!UBERON:0002171;2.75e-12;1!UBERON:0006518;2.75e-12;1!UBERON:0008949;2.75e-12;1!UBERON:0000101;2.75e-12;1!UBERON:0002167;2.75e-12;1!UBERON:0000974;2.86e-08;6!UBERON:0003126;1.90e-07;7!UBERON:0001005;1.90e-07;7!UBERON:0006955;4.97e-07;2!UBERON:0004801;4.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.01e-23,2;UBERON:0000341,6.12e-23,2;UBERON:0002171,2.46e-12,1;UBERON:0006518,2.46e-12,1;UBERON:0008949,2.46e-12,1;UBERON:0000101,2.46e-12,1;UBERON:0002167,2.46e-12,1;UBERON:0005178,3.60e-08,34;UBERON:0002224,3.60e-08,34;UBERON:0005181,6.22e-08,35;UBERON:0003126,1.96e-07,7;UBERON:0001005,1.96e-07,7;UBERON:0008947,2.70e-07,38;UBERON:0003258,2.70e-07,38;UBERON:0006955,4.83e-07,2;UBERON:0004801,4.83e-07,2;UBERON:0007023,9.32e-07,114 | |||
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| 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| ||
|short_description=p1@TMEM190 | |||
}} | }} |
Latest revision as of 01:29, 20 September 2015
Short description: | p1@TMEM190 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM190_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -4bp_to_ENST00000291934, NM_139172, uc002qkt.1_5end |
EntrezGene: | TMEM190 |
HGNC: | 29632 |
UniProt: | Q8WZ59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.01e-23 | 2 |
throat | 6.12e-23 | 2 |
lower lobe of right lung | 2.46e-12 | 1 |
right lung lobe | 2.46e-12 | 1 |
lower lobe of lung | 2.46e-12 | 1 |
lobe of lung | 2.46e-12 | 1 |
right lung | 2.46e-12 | 1 |
thoracic cavity element | 3.60e-08 | 34 |
thoracic cavity | 3.60e-08 | 34 |
thoracic segment organ | 6.22e-08 | 35 |
trachea | 1.96e-07 | 7 |
respiratory airway | 1.96e-07 | 7 |
respiratory primordium | 2.70e-07 | 38 |
endoderm of foregut | 2.70e-07 | 38 |
uterine epithelium | 4.83e-07 | 2 |
cervix epithelium | 4.83e-07 | 2 |
adult organism | 9.32e-07 | 114 |