FFCP PHASE1:Hg19::chr5:126112987..126113012,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000463908_5end | |association_with_transcript=-58bp_to_ENST00000463908_5end | ||
|cluster_id=chr5:126112987..126113012,+ | |||
|description=CAGE_peak_4_at_LMNB1_5end | |description=CAGE_peak_4_at_LMNB1_5end | ||
|id=chr5:126112987..126113012,+ | |id=chr5:126112987..126113012,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.93e-07!182 | |ontology_enrichment_celltype=CL:0000988!2.93e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.45e-09;7!CL:0000586;8.45e-09;7!CL:0000540;8.58e-08;6!CL:0000404;8.58e-08;6!CL:0000084;9.24e-08;25!CL:0002322;5.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.82e-11,177;CL:0000047,8.86e-11,8;CL:0000037,2.87e-10,168;CL:0002032,2.52e-09,161;CL:0000837,2.52e-09,161;CL:0002087,7.49e-09,115;CL:0000039,8.37e-09,7;CL:0000586,8.37e-09,7;CL:0000838,1.60e-08,52;CL:0000738,2.84e-08,136;CL:0000542,2.97e-08,53;CL:0000051,2.97e-08,53;CL:0002031,5.54e-08,120;CL:0000084,7.17e-08,25;CL:0000827,7.17e-08,25;CL:0000540,1.04e-07,6;CL:0000031,1.04e-07,6;CL:0000404,1.04e-07,6;CL:0002322,1.27e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;8.58e-08;6 | |||
|ontology_enrichment_disease=DOID:162!2.63e-08!235;DOID:2531!1.29e-07!51;DOID:0060083!1.29e-07!51;DOID:14566!1.39e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.88e-07,39;DOID:2531,9.32e-07,51;DOID:0060083,9.32e-07,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.612002073732759,0.626909442956176,1.14494394852423,0.410623275218653,0.753255837568817,2.44522898393444,1.9704141467987,2.2826126580967,0,0.767658796194425,0.619264493264304,0,0,0,0.619737604642413,0.568676929949686,0.587200878669695,1.10799081706375,1.00272223735071,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0.309706370895104,4.31538588483226,2.81776777182011,2.12834006899727,0.344745680736619,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,1.27867425159808,3.95821560224059,5.58498241340569,5.54092175692502,0.290209238628584,0,0.622822248995575,4.77372463987812,3.65038042894141,3.25783267057675,0,0,0,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,1.68152568894461,0.526768169550154,1.7703879310245,3.14408610199332,1.23360899399706,0.167186495390678,0.977766799900771,0.946895611469467,0,0.445641827540694,1.47302953737419,0.443067789167242,0.541607727530031,1.15282187753108,0.910415432919148,1.31550323682941,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.566546713487831,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,4.83856183739358,2.40696176205157,1.59306844271079,0,1.34140171940727,0,1.0843174571537,0,0.289693037921647,0.795285947051099,0,1.13441780596881,0.886917589850256,0.351339142772504,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.993812036833525,0.860234595106124,0.347140501607594,0.56530794192401,0,1.10047216776027,0.626984899610432,0,0,0,0.805658634218294,0,0.976248230192678,2.20597848207521,0,0.714397826272638,0.22452937262617,0.563057402416611,1.53316637465883,0.949265659568129,0,0,0,0.436094052142534,0,0.506522046658319,0,1.14734648299525,1.06400514659507,0,0,0,0,0.538842688278752,0.490385709340376,0,0,0,0,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,0.98315564691574,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0,0.877955241761676,0,0.150238058906597,0.113432183160021,1.4351170855109,0,0,1.50045548042201,0.412210116953756,0,0.18611685633159,0.843881661206331,0.68205903612839,1.00973509697646,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,1.82960559194393,1.72288698817931,1.16193942869518,1.55491582523056,1.51392510525377,1.09493207722749,0,0.643240938192885,1.38134921352481,0,0,0.828147600278907,0.842923450390509,1.20505514941741,0.992645754591546,0.435758888184812,1.89816495288877,0.539325232640658,0.784885860501384,0.769494313892781,1.4763109092493,2.80483547606892,0,0,0,2.94848165003288,0.590789906681404,1.32438929824395,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.761016608938393,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0,0,0,0.141775097242386,0,0,0.383382679165211,0,1.23267807618516,0.414656231081544,1.15295962733569,0.37872730027914,0.253991577168676,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0.560655421726804,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.716243852959582,0.896681151948218,2.1673383622212,0.431255149719035,1.02674429023799,4.06551398755941,5.20559415430487,4.63973287666617,0.837581326671744,5.10351001322531,0.749007023947182,0,1.65766205374414,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0.781952530212746,0,0.343143423810856,1.86091223510599,1.50999940573032,0.853820462427555,0,0,0.30239029332968,0,0,0,0,0,0,0,0.462629081407967,0.710246901252508,0.739144404124282,0.519254429183621,0.929683027679674,3.74664293734029,0,0.0920809889358963,0.459257792658427,0.546273504020151,0.262248829918848,0,0.385076685522074,0,0,0.316654886678627,0,1.02056223165909,0.647747748306418,1.54227252690289,0,0.501689773854853,0.254876273045038,0.831076008928724,0.895499018888713,0.657779629937804,0,0,0,0,0.515205058238611,0.640986253728404,1.15513299888823,0,0,0,0.676695028044854,0.308097234229289,0.614014698904518,0.551346289938122,0.322260734604821,0.145016693914229,0.511359764496605,0.534192213880424,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.545999645631943,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.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| ||
|short_description=p4@LMNB1 | |short_description=p4@LMNB1 | ||
}} | }} |
Latest revision as of 01:38, 20 September 2015
Short description: | p4@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LMNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000463908_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.82e-11 | 177 |
neuronal stem cell | 8.86e-11 | 8 |
hematopoietic stem cell | 2.87e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.52e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-09 | 161 |
nongranular leukocyte | 7.49e-09 | 115 |
germ line cell | 8.37e-09 | 7 |
germ cell | 8.37e-09 | 7 |
lymphoid lineage restricted progenitor cell | 1.60e-08 | 52 |
leukocyte | 2.84e-08 | 136 |
lymphocyte | 2.97e-08 | 53 |
common lymphoid progenitor | 2.97e-08 | 53 |
hematopoietic lineage restricted progenitor cell | 5.54e-08 | 120 |
T cell | 7.17e-08 | 25 |
pro-T cell | 7.17e-08 | 25 |
neuron | 1.04e-07 | 6 |
neuroblast | 1.04e-07 | 6 |
electrically signaling cell | 1.04e-07 | 6 |
embryonic stem cell | 1.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.88e-07 | 39 |
hematologic cancer | 9.32e-07 | 51 |
immune system cancer | 9.32e-07 | 51 |