FFCP PHASE1:Hg19::chr1:205313304..205313315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539253_5end | |association_with_transcript=0bp_to_ENST00000539253_5end | ||
|cluster_id=chr1:205313304..205313315,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_6_at_KLHDC8A_5end | |description=CAGE_peak_6_at_KLHDC8A_5end |
Latest revision as of 02:42, 20 September 2015
Short description: | p6@KLHDC8A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLHDC8A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@KLHDC8A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
sympathetic nervous system | 1.04e-18 | 5 |
autonomic nervous system | 1.04e-18 | 5 |
Showing 1 to 10 of 35 entries
Ontology term | p-value | n |
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neuroendocrine tumor | 9.04e-16 | 6 |
neuroectodermal tumor | 7.40e-10 | 10 |
lung small cell carcinoma | 9.11e-07 | 4 |
Showing 1 to 3 of 3 entries