FFCP PHASE1:Hg19::chr4:103265880..103265893,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64116 | |EntrezGene=64116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |HGNC=20862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0K1 | |UniProt=Q9C0K1 | ||
|association_with_transcript=402bp_to_ENST00000394833_5end | |association_with_transcript=402bp_to_ENST00000394833_5end | ||
|cluster_id=chr4:103265880..103265893,- | |||
|description=CAGE_peak_4_at_SLC39A8_5end | |description=CAGE_peak_4_at_SLC39A8_5end | ||
|id=chr4:103265880..103265893,- | |id=chr4:103265880..103265893,- | ||
|ontology_enrichment_celltype=CL:0000037!2.81e-12!172;CL:0000566!2.81e-12!172;CL:0002032!9.72e-12!165;CL:0000837!9.72e-12!165;CL:0000988!2.58e-11!182;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112 | |ontology_enrichment_celltype=CL:0000037!2.81e-12!172;CL:0000566!2.81e-12!172;CL:0002032!9.72e-12!165;CL:0000837!9.72e-12!165;CL:0000988!2.58e-11!182;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.81e-14,168;CL:0000988,3.05e-14,177;CL:0002032,4.67e-14,161;CL:0000837,4.67e-14,161;CL:0000763,4.07e-11,108;CL:0000049,4.07e-11,108 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.02e-09;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.02e-09;29 | ||
|ontology_enrichment_disease=DOID:14566!2.32e-13!239;DOID:2531!5.92e-13!51;DOID:0060083!5.92e-13!51;DOID:0050686!1.25e-12!137;DOID:162!1.25e-12!235;DOID:1240!3.14e-11!39;DOID:8692!3.85e-10!31 | |ontology_enrichment_disease=DOID:14566!2.32e-13!239;DOID:2531!5.92e-13!51;DOID:0060083!5.92e-13!51;DOID:0050686!1.25e-12!137;DOID:162!1.25e-12!235;DOID:1240!3.14e-11!39;DOID:8692!3.85e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.75e-13;31!DOID:1240;1.17e-11;39!DOID:2531;1.62e-10;51!DOID:0060083;1.62e-10;51!DOID:1036;9.78e-07;8 | |ontology_enrichment_disease_v019=DOID:8692;4.75e-13;31!DOID:1240;1.17e-11;39!DOID:2531;1.62e-10;51!DOID:0060083;1.62e-10;51!DOID:1036;9.78e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,8.62e-17,51;DOID:0060083,8.62e-17,51;DOID:1240,3.30e-15,39;DOID:8692,1.42e-13,31;DOID:14566,1.22e-12,239;DOID:162,3.67e-12,235;DOID:0050686,2.27e-11,137;DOID:1036,5.38e-07,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.02e-08;9!UBERON:0001557;1.02e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.02e-08;9!UBERON:0001557;1.02e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.02e-08,9 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0.436882744260345,1.05506791291381,0.247532705920093,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.572471974262113,0.958120975510189,0.251085279189606,0.993374274723366,0.57470412614962,0.472264687882075,1.57345710739562,1.53531759238885,0.77408061658038,0.919421224478927,0.90361775633475,0,0.619737604642413,3.83856927716038,2.05520307534393,1.66198622559563,3.81034450193269,1.51907609501096,2.46307021663917,1.6194683300949,1.03030227053675,0,0.755751887377619,0,1.62700325833979,1.23350366406548,1.85823822537062,0.863077176966451,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0.752969358170419,0.272906150057846,2.24723484445085,1.22433556948361,2.88836124368484,0.639337125799041,0,0.398927315243264,0.426224750532694,2.90209238628584,3.97169657283798,4.35975574296902,0,1.5644487552606,0.434377689410233,3.63239701580021,2.94622108790052,1.26584954976354,0.211255286311942,0.425208599930087,0,0.22465726229299,0.300353785683013,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0.587237189370939,1.14681968437569,2.64342657158052,6.72610275577843,5.00429761072646,2.75393678159366,1.57204305099666,4.11202997999018,0.501559486172034,0.32592226663359,1.4203434172042,0,1.11410456885174,0.294605907474837,0.886135578334485,0,1.66518715643378,1.30059347559878,1.31550323682941,0.276350017785848,0.579606171470105,0.889719378972363,0,0,1.35971211237079,0,1.03088233644789,0.506039384039006,0.318565414324097,0,0,0.752875595388864,0.895906278080929,1.24930726552346,0.236777252044017,0,4.03213486449465,3.4767225451856,2.17236605824198,0,0,0,0.361439152384566,0,0,0.795285947051099,0,1.22895262313288,0,0.614843499851882,0.982343066232845,0,0,1.29818957461873,0.348259474598534,1.72845348674525,0,0.571994910780128,0,0.79504962946682,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.446498641420399,0.22452937262617,0.563057402416611,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0.794455084879313,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0,0,0,0.624320153660641,1.1409436430889,0,0.469737994575059,1.29498355494505,0.842704840213491,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.831192346452549,0,0,1.05166641234618,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.966304265816484,0.818238361772504,2.86804595389004,0.853815942907168,0.530119073285941,0.929551542956147,1.45125477021519,1.26160425437814,0,1.56449532329816,0.643240938192885,1.38134921352481,1.39310378409594,0.721879481669586,5.20549920175313,5.39471008249925,3.61516544825223,3.97058301836618,5.44698610231015,5.21995362044413,4.85392709376592,4.12065076763227,3.8474715694639,0,0,0.4115740113314,0,2.53510069643662,5.89696330006576,4.72631925345123,1.7658523976586,0.491953754172454,1.3725424823882,0.548751427043128,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0,0.462985512576611,0.190254152234598,0.790204397959275,1.71697232418975,4.67812311566055,3.7440682422278,4.90482835552803,0,0.503946384596579,0.283550194484773,1.79117045405697,0.871901815541886,1.53353071666084,3.4486426652716,1.67292024625129,1.24396869324463,0.864719720501769,0.6312121671319,0.317489471460845,0.763976851116555,0,0,0.822619941626588,0,0.285826432630578,0.448524337381443,0,0.5867062865676,0.517086863031111,0,0.845302752556,0.797814349754612,0,0,1.41849132023278,0,0,0,0,0,0.355391948742546,0,3.61727252471503,3.48613383440118,3.29910870900788,2.43247561282381,2.51128545716063,0,0.479249710983165,0,0,0.723906533337896,0.410952645100767,0.358121926479791,2.91421374383171,2.36436912242313,2.80315847317372,2.05348858047597,0.254094624222463,1.30139853857622,0,0,0,0,0,0.828831026872071,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,1.44737618286021,0.862856803274467,1.28073069364133,0,6.65741758041988,0.604780586659361,0.496215615637554,0.153461973288062,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.116210378459959,0.241718899183244,1.00253235151642,0.460404944679482,0.114814448164607,0,0.131124414959424,0,0.616122696835318,0,1.46139224653261,0.633309773357254,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,2.85037839639715,3.92153176537351,0.769350375349168,0,0.325378394664303,7.93415789687461,2.38080608527693,2.22775649785588,0.574265537996172,1.30012049207304,1.6068392984416,0,0.154048617114644,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0.596586391912706,0,0.661139661443912,0.768760269460425,0.893288987462089,1.2138933702666,1.39453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| ||
|short_description=p4@SLC39A8 | |short_description=p4@SLC39A8 | ||
}} | }} |
Latest revision as of 03:35, 20 September 2015
Short description: | p4@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC39A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 402bp_to_ENST00000394833_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.81e-14 | 168 |
hematopoietic cell | 3.05e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.67e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.67e-14 | 161 |
myeloid cell | 4.07e-11 | 108 |
common myeloid progenitor | 4.07e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.02e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.62e-17 | 51 |
immune system cancer | 8.62e-17 | 51 |
leukemia | 3.30e-15 | 39 |
myeloid leukemia | 1.42e-13 | 31 |
disease of cellular proliferation | 1.22e-12 | 239 |
cancer | 3.67e-12 | 235 |
organ system cancer | 2.27e-11 | 137 |
chronic leukemia | 5.38e-07 | 8 |