FFCP PHASE1:Hg19::chr4:103422457..103422469,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:103422457..103422469,+ to FFCP PHASE1:Hg19::chr4:103422457..103422469,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt=P19838 | |UniProt=P19838 | ||
|association_with_transcript=-16bp_to_ENST00000226574,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | |||
|cluster_id=chr4:103422457..103422469,+ | |||
|description=CAGE_peak_3_at_NFKB1_5end | |||
|id=chr4:103422457..103422469,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.29e-09!42;CL:0000860!1.41e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-17;33!CL:0002057;4.69e-17;33!CL:0000473;1.48e-10;39!CL:0000234;1.48e-10;39!CL:0000576;2.98e-08;48!CL:0000453;6.77e-07;5!CL:0000766;9.84e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-16,42;CL:0002057,2.01e-16,42;CL:0000473,5.69e-13,48;CL:0000234,5.69e-13,48;CL:0000557,3.13e-11,67;CL:0000766,9.82e-11,72;CL:0000839,1.29e-09,66;CL:0002009,1.37e-09,61;CL:0002194,2.40e-08,59;CL:0000576,2.40e-08,59;CL:0000040,2.40e-08,59;CL:0000559,2.40e-08,59;CL:0000738,5.19e-08,136;CL:0000763,3.85e-07,108;CL:0000049,3.85e-07,108;CL:0000453,8.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.75e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.49e-10,76;UBERON:0001474,4.81e-09,82;UBERON:0002405,6.22e-09,93;UBERON:0002390,5.25e-08,98;UBERON:0003061,5.25e-08,98;UBERON:0004765,3.13e-07,90;UBERON:0002193,6.50e-07,108;UBERON:0001434,8.85e-07,100 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,1.78784437770915,0.872338524100369,0,0,0.783556884599516,0.491467873003018,0.697801167972428,0.436882744260345,0.791300934685361,0.866364470720326,0.331397375727916,0,0.602694528023977,0,0.487932798790507,1.10808952269109,1.22400414746552,0.626909442956176,1.71741592278634,0.684372125364421,0.376627918784408,1.14620108621927,0.410502947249729,1.10195093839151,0,0.767658796194425,1.70297735647684,0,0.6024118375565,1.10926203050036,0.387336002901508,0.710846162437108,0,3.87796785972314,2.20598892217156,1.30206522429511,0.223915474239924,0.32389366601898,0.515151135268373,0.581592955118259,0.377875943688809,0.970336244751265,2.55671940596253,4.93401465626191,3.40677007984614,3.45230870786581,2.0492856522328,4.02019790810595,2.41321976515633,5.16387746867061,1.35426486594342,2.63539275359647,3.0019676506363,2.9214052977861,3.06083892370903,4.49300637906531,5.11469700639233,0.329851300186716,1.59570926097305,1.70489900213078,6.09439401120026,7.94339314567596,9.34233373493363,1.7587406567972,2.08593167368081,2.17188844705117,4.84319602106695,5.89244217580104,8.54448446090388,0.211255286311942,0.637812899895131,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,0,1.12101712596307,0.526768169550154,1.37696839079683,1.17903228824749,1.02800749499755,0.167186495390678,0.977766799900771,1.4203434172042,0,0.222820913770347,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0.226618685395132,1.14966148080576,1.03088233644789,1.26509846009751,1.27426165729639,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,1.81446068902259,0.534880391567015,1.73789284659359,4.87613732627923,0.670700859703636,0.895037932904712,1.80719576192283,0,0.579386075843295,0,1.45990461090791,0.945348171640679,1.77383517970051,0.527008714158756,0.916853528483988,0.364295288292542,0.741568885568859,0.97364218096405,0.696518949197069,0.398873881556595,0.715471872916026,0.571994910780128,0,0,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0,1.03366703667732,0.35576626268671,0.66944122552934,1.20848795132744,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0.22452937262617,0.563057402416611,0,0,0.183201743930407,1.31780417436063,0,1.3082821564276,0,0.506522046658319,1.45650098894541,1.72101972449288,1.06400514659507,0.560677600142307,2.1349799145941,0,0.933633106199299,0.269421344139376,0.490385709340376,1.21085942115945,1.15235184896,0.70296429550139,0.624320153660641,0.570471821544449,0.448346041655403,0.469737994575059,0.647491777472526,0.421352420106746,0.408308342509787,0.245668634623536,0.413303124703062,2.37600571456411,0,0.910161361938026,0.718618141816238,1.0100166837244,0.375355559615893,0,0.438977620880838,2.45190236639216,0.901428353439581,0.453728732640084,1.07633781413317,0.427114777637135,0.635795703478686,1.20036438433761,1.03052529238439,0.772921620136887,1.11670113798954,0.843881661206331,0.779496041289589,1.7670364197088,0.828449087780694,1.2931684545505,1.06502877754984,0.604512589365842,0.67824236924195,0,0.818238361772504,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.482022059766964,0.661763836394364,0.435758888184812,0,0.943819157121151,0.392442930250692,0.769494313892781,0,0,3.2925920906512,0,2.53510069643662,1.96565443335525,1.77236972004421,0,0.491953754172454,0.514703430895577,0.548751427043128,1.1240175325762,0.402115889646523,0.370353780634118,0,0,0,0.34779121492523,0.117408694235822,0.721832238805369,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.984868024349589,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,0.53735113621709,0.581267877027924,0.383382679165211,0.985326475791887,1.32072651019839,4.97587477297853,2.01767934783746,4.92345490362882,0.380987365753014,0.763976851116555,0,0,0.925447434329912,0.600686115687835,0,0.448524337381443,0.87192013766656,0.36669142910475,0.387815147273333,3.57656445851882,0,1.59562869950922,0,0.514414748524284,1.41849132023278,0.532844358032199,0.428933980974443,0.542621605391443,1.64648067356154,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.239624855491583,0,4.27910715122155,0.144781306667579,0.821905290201534,0.895304816199478,0.224170287987055,0.591092280605782,1.50939302401662,1.02674429023799,1.01637849688985,0,0,0.167516265334349,1.27587750330633,1.49801404789436,0,1.24324654030811,0.613457458595699,0,0.813795071099207,0.623912584592421,0.178428988797162,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0.553107505625109,1.39013783148933,0.587403472388222,1.02943027143257,1.03384013061444,0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| ||
|short_description=p3@NFKB1 | |||
}} | }} |
Latest revision as of 03:55, 20 September 2015
Short description: | p3@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFKB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000226574, NM_001165412, NM_003998, uc011cep.1, uc011ceq.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | P19838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-16 | 42 |
defensive cell | 5.69e-13 | 48 |
phagocyte | 5.69e-13 | 48 |
granulocyte monocyte progenitor cell | 3.13e-11 | 67 |
myeloid leukocyte | 9.82e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-09 | 66 |
macrophage dendritic cell progenitor | 1.37e-09 | 61 |
monopoietic cell | 2.40e-08 | 59 |
monocyte | 2.40e-08 | 59 |
monoblast | 2.40e-08 | 59 |
promonocyte | 2.40e-08 | 59 |
leukocyte | 5.19e-08 | 136 |
myeloid cell | 3.85e-07 | 108 |
common myeloid progenitor | 3.85e-07 | 108 |
Langerhans cell | 8.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.49e-10 | 76 |
bone element | 4.81e-09 | 82 |
immune system | 6.22e-09 | 93 |
hematopoietic system | 5.25e-08 | 98 |
blood island | 5.25e-08 | 98 |
skeletal element | 3.13e-07 | 90 |
hemolymphoid system | 6.50e-07 | 108 |
skeletal system | 8.85e-07 | 100 |