FFCP PHASE2:Hg19::chr12:69201923..69202028,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4193 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6973 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6973 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PF57,Q96DS0,Q00987 | ||
|association_with_transcript=0bp_to_ENST00000258149,ENST00000311440,ENST00000356290,ENST00000358483,ENST00000393412,ENST00000428863,ENST00000462284,ENST00000540827,ENST00000544648,NM_002392,uc001sui.2,uc001suk.2,uc009zqw.2,uc009zqx.2,uc009zri.2_5end | |association_with_transcript=0bp_to_ENST00000258149,ENST00000311440,ENST00000356290,ENST00000358483,ENST00000393412,ENST00000428863,ENST00000462284,ENST00000540827,ENST00000544648,NM_002392,uc001sui.2,uc001suk.2,uc009zqw.2,uc009zqx.2,uc009zri.2_5end | ||
|cluster_id=chr12:69201923..69202028,+ | |cluster_id=chr12:69201923..69202028,+ | ||
Latest revision as of 03:55, 20 September 2015
| Short description: | p1@MDM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MDM2_5end |
| Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
| Association with transcript: | 0bp_to_ENST00000258149, ENST00000311440, ENST00000356290, ENST00000358483, ENST00000393412, ENST00000428863, ENST00000462284, ENST00000540827, ENST00000544648, NM_002392, uc001sui.2, uc001suk.2, uc009zqw.2, uc009zqx.2, uc009zri.2_5end |
| EntrezGene: | MDM2 |
| HGNC: | 6973 |
| UniProt: | E9PF57Q96DS0Q00987 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@MDM2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 7.36e-32 | 136 |
| hematopoietic stem cell | 8.61e-30 | 168 |
| hematopoietic oligopotent progenitor cell | 1.21e-28 | 161 |
| hematopoietic multipotent progenitor cell | 1.21e-28 | 161 |
| hematopoietic cell | 3.94e-28 | 177 |
| nongranular leukocyte | 6.77e-28 | 115 |
| hematopoietic lineage restricted progenitor cell | 3.42e-26 | 120 |
| myeloid leukocyte | 1.14e-17 | 72 |
| myeloid cell | 1.88e-16 | 108 |
| common myeloid progenitor | 1.88e-16 | 108 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.00e-15 | 98 |
| blood island | 4.00e-15 | 98 |
| hemolymphoid system | 1.05e-11 | 108 |
| bone element | 1.59e-11 | 82 |
| bone marrow | 1.23e-10 | 76 |
| immune system | 1.01e-08 | 93 |
| skeletal element | 6.19e-08 | 90 |
| skeletal system | 4.34e-07 | 100 |
Showing 1 to 8 of 8 entries
