FFCP PHASE1:Hg19::chr7:94540075..94540082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55607 | |EntrezGene=55607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14946 | |HGNC=14946 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULJ8 | |UniProt=Q9ULJ8 | ||
|association_with_transcript=-409bp_to_AB033048_5end | |association_with_transcript=-409bp_to_AB033048_5end | ||
|cluster_id=chr7:94540075..94540082,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_21_at_PPP1R9A_5end | |description=CAGE_peak_21_at_PPP1R9A_5end | ||
|id=chr7:94540075..94540082,+ | |id=chr7:94540075..94540082,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;4.27e-34;6!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.27e-34,6;CL:0000138,4.27e-34,6;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!4.73e-15!1;DOID:4549!4.73e-15!1;DOID:5861!4.73e-15!1;DOID:6496!4.73e-15!1;DOID:0050619!1.07e-14!1;DOID:1357!1.07e-14!1 | |ontology_enrichment_disease=DOID:3371!4.73e-15!1;DOID:4549!4.73e-15!1;DOID:5861!4.73e-15!1;DOID:6496!4.73e-15!1;DOID:0050619!1.07e-14!1;DOID:1357!1.07e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;5.42e-195;1!DOID:4549;5.42e-195;1!DOID:5861;5.42e-195;1!DOID:6496;5.42e-195;1!DOID:201;4.27e-34;6!DOID:0060100;4.27e-34;6!DOID:1115;2.29e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.42e-195,1;DOID:4549,5.42e-195,1;DOID:5861,5.42e-195,1;DOID:6496,5.42e-195,1;DOID:201,4.27e-34,6;DOID:0060100,4.27e-34,6;DOID:1115,2.29e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-17!57;UBERON:0005068!2.37e-17!57;UBERON:0006241!2.37e-17!57;UBERON:0007135!2.37e-17!57;UBERON:0002346!2.94e-16!90;UBERON:0001764!1.07e-14!1;UBERON:0001825!1.07e-14!1;UBERON:0001017!1.51e-14!82;UBERON:0001882!1.61e-14!1;UBERON:0005403!1.61e-14!1;UBERON:0002022!1.84e-14!1;UBERON:0007190!2.41e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0000955!4.98e-14!69;UBERON:0006238!4.98e-14!69;UBERON:0003075!5.25e-14!86;UBERON:0007284!5.25e-14!86;UBERON:0001869!5.85e-14!32;UBERON:0005743!7.79e-14!86;UBERON:0002616!3.43e-13!59;UBERON:0002020!3.48e-13!34;UBERON:0003528!3.48e-13!34;UBERON:0001893!3.80e-13!34;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0000349!1.50e-11!5;UBERON:0000153!6.54e-11!129;UBERON:0007811!6.54e-11!129;UBERON:0002780!6.56e-11!41;UBERON:0001890!6.56e-11!41;UBERON:0006240!6.56e-11!41;UBERON:0003080!1.20e-10!42;UBERON:0001950!3.13e-10!20;UBERON:0003056!7.56e-10!61;UBERON:0000200!1.32e-09!6;UBERON:0002791!1.34e-09!33;UBERON:0000033!2.16e-09!123;UBERON:0002619!2.31e-09!22;UBERON:0003076!1.52e-08!15;UBERON:0003057!1.52e-08!15;UBERON:0000956!2.62e-08!25;UBERON:0000203!2.62e-08!25;UBERON:0007023!2.82e-08!115;UBERON:0000341!4.09e-08!2;UBERON:0001876!5.74e-08!2;UBERON:0002148!6.15e-08!2;UBERON:0009662!6.15e-08!2;UBERON:0000924!9.00e-08!173;UBERON:0006601!9.00e-08!173;UBERON:0001870!9.19e-08!2;UBERON:0002298!1.65e-07!8;UBERON:0002420!8.34e-07!9;UBERON:0007245!8.34e-07!9;UBERON:0010009!8.34e-07!9;UBERON:0010011!8.34e-07!9;UBERON:0000454!8.34e-07!9;UBERON:0002308!8.59e-07!9;UBERON:0000125!8.59e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!2.37e-17!57;UBERON:0005068!2.37e-17!57;UBERON:0006241!2.37e-17!57;UBERON:0007135!2.37e-17!57;UBERON:0002346!2.94e-16!90;UBERON:0001764!1.07e-14!1;UBERON:0001825!1.07e-14!1;UBERON:0001017!1.51e-14!82;UBERON:0001882!1.61e-14!1;UBERON:0005403!1.61e-14!1;UBERON:0002022!1.84e-14!1;UBERON:0007190!2.41e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0000955!4.98e-14!69;UBERON:0006238!4.98e-14!69;UBERON:0003075!5.25e-14!86;UBERON:0007284!5.25e-14!86;UBERON:0001869!5.85e-14!32;UBERON:0005743!7.79e-14!86;UBERON:0002616!3.43e-13!59;UBERON:0002020!3.48e-13!34;UBERON:0003528!3.48e-13!34;UBERON:0001893!3.80e-13!34;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0000349!1.50e-11!5;UBERON:0000153!6.54e-11!129;UBERON:0007811!6.54e-11!129;UBERON:0002780!6.56e-11!41;UBERON:0001890!6.56e-11!41;UBERON:0006240!6.56e-11!41;UBERON:0003080!1.20e-10!42;UBERON:0001950!3.13e-10!20;UBERON:0003056!7.56e-10!61;UBERON:0000200!1.32e-09!6;UBERON:0002791!1.34e-09!33;UBERON:0000033!2.16e-09!123;UBERON:0002619!2.31e-09!22;UBERON:0003076!1.52e-08!15;UBERON:0003057!1.52e-08!15;UBERON:0000956!2.62e-08!25;UBERON:0000203!2.62e-08!25;UBERON:0007023!2.82e-08!115;UBERON:0000341!4.09e-08!2;UBERON:0001876!5.74e-08!2;UBERON:0002148!6.15e-08!2;UBERON:0009662!6.15e-08!2;UBERON:0000924!9.00e-08!173;UBERON:0006601!9.00e-08!173;UBERON:0001870!9.19e-08!2;UBERON:0002298!1.65e-07!8;UBERON:0002420!8.34e-07!9;UBERON:0007245!8.34e-07!9;UBERON:0010009!8.34e-07!9;UBERON:0010011!8.34e-07!9;UBERON:0000454!8.34e-07!9;UBERON:0002308!8.59e-07!9;UBERON:0000125!8.59e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.39e-66;3!UBERON:0004755;2.39e-66;3!UBERON:0001474;1.85e-12;18!UBERON:0004765;4.34e-09;26!UBERON:0001434;2.32e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.39e-66,3;UBERON:0004755,2.39e-66,3 | |||
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|short_description=p21@PPP1R9A | |short_description=p21@PPP1R9A | ||
}} | }} |
Latest revision as of 04:28, 20 September 2015
Short description: | p21@PPP1R9A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PPP1R9A_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -409bp_to_AB033048_5end |
EntrezGene: | PPP1R9A |
HGNC: | 14946 |
UniProt: | Q9ULJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.27e-34 | 6 |
chondrocyte | 4.27e-34 | 6 |
GAG secreting cell | 2.62e-23 | 9 |
carbohydrate secreting cell | 2.62e-23 | 9 |
extracellular matrix secreting cell | 1.22e-14 | 15 |
stromal cell | 1.52e-08 | 28 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.39e-66 | 3 |
skeletal tissue | 2.39e-66 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.42e-195 | 1 |
extraosseous chondrosarcoma | 5.42e-195 | 1 |
myxoid chondrosarcoma | 5.42e-195 | 1 |
extraskeletal myxoid chondrosarcoma | 5.42e-195 | 1 |
connective tissue cancer | 4.27e-34 | 6 |
musculoskeletal system cancer | 4.27e-34 | 6 |
sarcoma | 2.29e-11 | 20 |