FFCP PHASE1:Hg19::chr7:95226025..95226032,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |||
|TSSclassifier=strong | |||
|UniProt=A4D1H4,Q16654 | |||
|association_with_transcript=-100bp_to_NM_002612,uc003uoa.2_5end | |||
|cluster_id=chr7:95226025..95226032,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_37_at_PDK4_5end | |||
|id=chr7:95226025..95226032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.64e-13;13!CL:0000945;1.36e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.51e-12,14;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-18!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0000996;2.21e-40;1!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0001134;5.28e-11;16!UBERON:0002036;5.28e-11;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.62e-41,1;UBERON:0001389,6.62e-41,1;UBERON:0000026,6.62e-41,1;UBERON:0008784,6.62e-41,1;UBERON:0006058,6.62e-41,1;UBERON:0003663,6.62e-41,1;UBERON:0004256,6.62e-41,1;UBERON:0004708,6.62e-41,1;UBERON:0002101,6.62e-41,1;UBERON:0004709,6.62e-41,1;UBERON:0002529,6.62e-41,1;UBERON:0010538,6.62e-41,1;UBERON:0003661,6.62e-41,1;UBERON:0010890,6.62e-41,1;UBERON:0002471,6.62e-41,1;UBERON:0001383,6.62e-41,1;UBERON:0004357,6.62e-41,1;UBERON:0004347,6.62e-41,1;UBERON:0005420,6.62e-41,1;UBERON:0005732,6.62e-41,1;UBERON:0010758,6.62e-41,1;UBERON:0010707,6.62e-41,1;UBERON:0000978,6.62e-41,1;UBERON:0002103,6.62e-41,1;UBERON:0001665,6.62e-41,1;UBERON:0003823,6.62e-41,1;UBERON:0000154,6.62e-41,1;UBERON:0010709,6.62e-41,1;UBERON:0005733,6.62e-41,1;UBERON:0005730,6.62e-41,1;UBERON:0000996,3.30e-40,1;UBERON:0005090,3.11e-21,2;UBERON:0001630,3.11e-21,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0.570025487482497,0.19891667719909,0,1.75996244461323,0,0,0,0.400395987036012,1.72425731986345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.919036730290385,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,5.17943069750316,3.59319823996865,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,1.33151354837103,0.201273793591026,0 | |||
|short_description=p37@PDK4 | |||
}} |
Latest revision as of 05:09, 20 September 2015
Short description: | p37@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_PDK4_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -100bp_to_NM_002612, uc003uoa.2_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | A4D1H4Q16654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.51e-12 | 14 |
lymphocyte of B lineage | 1.31e-07 | 24 |
pro-B cell | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.62e-41 | 1 |
soleus muscle | 6.62e-41 | 1 |
appendage | 6.62e-41 | 1 |
lower limb segment | 6.62e-41 | 1 |
multi-limb segment region | 6.62e-41 | 1 |
hindlimb muscle | 6.62e-41 | 1 |
hindlimb zeugopod muscle | 6.62e-41 | 1 |
paired limb/fin | 6.62e-41 | 1 |
limb | 6.62e-41 | 1 |
pelvic appendage | 6.62e-41 | 1 |
limb segment | 6.62e-41 | 1 |
paired limb/fin segment | 6.62e-41 | 1 |
limb muscle | 6.62e-41 | 1 |
pelvic complex muscle | 6.62e-41 | 1 |
zeugopod | 6.62e-41 | 1 |
muscle of leg | 6.62e-41 | 1 |
paired limb/fin bud | 6.62e-41 | 1 |
limb bud | 6.62e-41 | 1 |
pelvic appendage bud | 6.62e-41 | 1 |
limb/fin field | 6.62e-41 | 1 |
subdivision of organism along appendicular axis | 6.62e-41 | 1 |
appendage girdle complex | 6.62e-41 | 1 |
leg | 6.62e-41 | 1 |
hindlimb | 6.62e-41 | 1 |
triceps surae | 6.62e-41 | 1 |
hindlimb zeugopod | 6.62e-41 | 1 |
posterior region of body | 6.62e-41 | 1 |
pelvic complex | 6.62e-41 | 1 |
limb field | 6.62e-41 | 1 |
hindlimb/pelvic fin field | 6.62e-41 | 1 |
vagina | 3.30e-40 | 1 |
muscle structure | 3.11e-21 | 2 |
muscle organ | 3.11e-21 | 2 |