FFCP PHASE1:Hg19::chr1:206858668..206858751,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:206858668..206858751,+ to FFCP PHASE1:Hg19::chr1:206858668..206858751,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9261 | |EntrezGene=9261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6887 | |HGNC=6887 | ||
|TSSclassifier=strong | |||
|UniProt=P49137 | |UniProt=P49137 | ||
|association_with_transcript=81bp_to_X75346_5end | |||
|cluster_id=chr1:206858668..206858751,+ | |||
|description=CAGE_peak_3_at_MAPKAPK2_5end | |||
|id=chr1:206858668..206858751,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.33e-14!76;CL:0000557!4.12e-11!71;CL:0002057!6.73e-10!42;CL:0000048!3.42e-09!430;CL:0000034!3.55e-09!444;CL:0000839!5.10e-09!70;CL:0000723!5.23e-09!436;CL:0002009!8.67e-09!65;CL:0002194!4.26e-08!63;CL:0000576!4.26e-08!63;CL:0000040!4.26e-08!63;CL:0000559!4.26e-08!63;CL:0000860!6.18e-08!45;CL:0002371!9.92e-08!591;CL:0000738!7.65e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.37e-13;33!CL:0002057;9.37e-13;33!CL:0000473;8.25e-10;39!CL:0000234;8.25e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.58e-16,72;CL:0000557,3.70e-13,67;CL:0000839,4.65e-11,66;CL:0002009,1.36e-10,61;CL:0000860,7.55e-10,42;CL:0002057,7.55e-10,42;CL:0002194,7.97e-10,59;CL:0000576,7.97e-10,59;CL:0000040,7.97e-10,59;CL:0000559,7.97e-10,59;CL:0000048,1.01e-09,427;CL:0000034,1.55e-09,441;CL:0000723,2.08e-09,433;CL:0000473,3.02e-09,48;CL:0000234,3.02e-09,48;CL:0000738,7.56e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.29e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.84e-13!167;UBERON:0003081!5.76e-13!216;UBERON:0002371!5.15e-12!80;UBERON:0002390!2.88e-11!102;UBERON:0003061!2.88e-11!102;UBERON:0002193!8.04e-11!112;UBERON:0001474!4.55e-10!86;UBERON:0000926!1.11e-09!448;UBERON:0004120!1.11e-09!448;UBERON:0006603!1.11e-09!448;UBERON:0002405!2.15e-08!115;UBERON:0004765!3.13e-08!101;UBERON:0001434!3.13e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.27e-17,315;UBERON:0004120,2.27e-17,315;UBERON:0006603,2.27e-17,315;UBERON:0003081,3.14e-14,203;UBERON:0002371,4.94e-14,76;UBERON:0002204,6.36e-14,167;UBERON:0002390,4.30e-13,98;UBERON:0003061,4.30e-13,98;UBERON:0002405,1.44e-12,93;UBERON:0002193,2.56e-12,108;UBERON:0001474,1.43e-11,82;UBERON:0004765,3.58e-10,90;UBERON:0001434,1.28e-08,100 | |||
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| ||
|short_description=p3@MAPKAPK2 | |||
}} | }} |
Latest revision as of 05:35, 20 September 2015
Short description: | p3@MAPKAPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAPKAPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_X75346_5end |
EntrezGene: | MAPKAPK2 |
HGNC: | 6887 |
UniProt: | P49137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.58e-16 | 72 |
granulocyte monocyte progenitor cell | 3.70e-13 | 67 |
myeloid lineage restricted progenitor cell | 4.65e-11 | 66 |
macrophage dendritic cell progenitor | 1.36e-10 | 61 |
classical monocyte | 7.55e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.55e-10 | 42 |
monopoietic cell | 7.97e-10 | 59 |
monocyte | 7.97e-10 | 59 |
monoblast | 7.97e-10 | 59 |
promonocyte | 7.97e-10 | 59 |
multi fate stem cell | 1.01e-09 | 427 |
stem cell | 1.55e-09 | 441 |
somatic stem cell | 2.08e-09 | 433 |
defensive cell | 3.02e-09 | 48 |
phagocyte | 3.02e-09 | 48 |
leukocyte | 7.56e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.27e-17 | 315 |
mesoderm-derived structure | 2.27e-17 | 315 |
presumptive mesoderm | 2.27e-17 | 315 |
lateral plate mesoderm | 3.14e-14 | 203 |
bone marrow | 4.94e-14 | 76 |
musculoskeletal system | 6.36e-14 | 167 |
hematopoietic system | 4.30e-13 | 98 |
blood island | 4.30e-13 | 98 |
immune system | 1.44e-12 | 93 |
hemolymphoid system | 2.56e-12 | 108 |
bone element | 1.43e-11 | 82 |
skeletal element | 3.58e-10 | 90 |
skeletal system | 1.28e-08 | 100 |