FFCP PHASE1:Hg19::chr22:38146987..38147008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11078 | |EntrezGene=11078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17009 | |HGNC=17009 | ||
|TSSclassifier=strong | |||
|UniProt=F6TR96 | |UniProt=F6TR96 | ||
|association_with_transcript=0bp_to_ENST00000418339_5end | |association_with_transcript=0bp_to_ENST00000418339_5end | ||
|cluster_id=chr22:38146987..38147008,+ | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_5_at_TRIOBP_5end | |description=CAGE_peak_5_at_TRIOBP_5end | ||
|id=chr22:38146987..38147008,+ | |id=chr22:38146987..38147008,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.30e-11!254;CL:0000077!3.84e-11!19;CL:0002586!5.30e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.30e-11!254;CL:0000077!3.84e-11!19;CL:0002586!5.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.84e-27;3!CL:0000149;1.27e-20;4!CL:0000077;1.54e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.75e-27,3;CL:0000149,8.84e-21,4;CL:0000077,1.61e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.61e-10;1 | |||
|ontology_enrichment_disease=DOID:305!6.72e-11!106;DOID:0050687!1.96e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002075!1.82e-09!18;UBERON:0001048!3.04e-08!168;UBERON:0001264!3.82e-08!10;UBERON:0003922!3.82e-08!10;UBERON:0003923!3.82e-08!10;UBERON:0003924!3.82e-08!10;UBERON:0003921!3.82e-08!10;UBERON:0002114!8.96e-08!12;UBERON:0000464!1.47e-07!104;UBERON:0000077!2.00e-07!130;UBERON:0001045!2.79e-07!11;UBERON:0005177!2.89e-07!107;UBERON:0000466!3.44e-07!126;UBERON:0000481!4.19e-07!347;UBERON:0001781!5.30e-07!3;UBERON:0001782!5.30e-07!3;UBERON:0005424!5.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.84e-27;3!UBERON:0001782;2.84e-27;3!UBERON:0000966;1.27e-16;5!UBERON:0005388;1.27e-16;5!UBERON:0001802;1.27e-16;5!UBERON:0001264;3.01e-14;10!UBERON:0002075;5.41e-12;18!UBERON:0000949;6.17e-08;43!UBERON:0007625;7.76e-08;11!UBERON:0000019;1.28e-07;19!UBERON:0000047;1.28e-07;19!UBERON:0004088;1.28e-07;19!UBERON:0010230;1.28e-07;19!UBERON:0000970;3.04e-07;20!UBERON:0002104;6.65e-07;21!UBERON:0001456;6.65e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.75e-27,3;UBERON:0005424,1.75e-27,3;UBERON:0001781,8.84e-21,4;UBERON:0001264,2.49e-14,10;UBERON:0000966,4.72e-14,6;UBERON:0005388,4.72e-14,6;UBERON:0001802,4.72e-14,6;UBERON:0002075,5.29e-12,18;UBERON:0000949,8.57e-09,45;UBERON:0007625,6.83e-08,11;UBERON:0000019,3.09e-07,20;UBERON:0000047,3.09e-07,20;UBERON:0010312,3.09e-07,20;UBERON:0004088,3.09e-07,20;UBERON:0010230,3.09e-07,20;UBERON:0003072,3.09e-07,20;UBERON:0004128,3.09e-07,20;UBERON:0003071,3.09e-07,20;UBERON:0000970,6.76e-07,21;UBERON:0002104,6.76e-07,21 | |||
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| ||
|short_description=p5@TRIOBP | |short_description=p5@TRIOBP | ||
}} | }} |
Latest revision as of 06:12, 20 September 2015
Short description: | p5@TRIOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIOBP_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | 0bp_to_ENST00000418339_5end |
EntrezGene: | TRIOBP |
HGNC: | 17009 |
UniProt: | F6TR96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.75e-27 | 3 |
visual pigment cell | 8.84e-21 | 4 |
mesothelial cell | 1.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.75e-27 | 3 |
presumptive retinal pigmented epithelium | 1.75e-27 | 3 |
layer of retina | 8.84e-21 | 4 |
pancreas | 2.49e-14 | 10 |
retina | 4.72e-14 | 6 |
photoreceptor array | 4.72e-14 | 6 |
posterior segment of eyeball | 4.72e-14 | 6 |
viscus | 5.29e-12 | 18 |
endocrine system | 8.57e-09 | 45 |
pigment epithelium of eye | 6.83e-08 | 11 |
camera-type eye | 3.09e-07 | 20 |
simple eye | 3.09e-07 | 20 |
immature eye | 3.09e-07 | 20 |
ocular region | 3.09e-07 | 20 |
eyeball of camera-type eye | 3.09e-07 | 20 |
optic cup | 3.09e-07 | 20 |
optic vesicle | 3.09e-07 | 20 |
eye primordium | 3.09e-07 | 20 |
eye | 6.76e-07 | 21 |
visual system | 6.76e-07 | 21 |