FFCP PHASE1:Hg19::chr10:99030395..99030434,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84986 | |EntrezGene=84986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23724 | |HGNC=23724 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000355366,ENST00000371027,uc001kna.2_5end | |association_with_transcript=0bp_to_ENST00000355366,ENST00000371027,uc001kna.2_5end | ||
|cluster_id=chr10:99030395..99030434,- | |||
|description=CAGE_peak_2_at_ARHGAP19_5end | |description=CAGE_peak_2_at_ARHGAP19_5end | ||
|id=chr10:99030395..99030434,- | |id=chr10:99030395..99030434,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;4.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,5.12e-07,3;CL:0000513,5.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.33e-15;3!UBERON:0003057;2.33e-15;3!CL:0000513;4.96e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;8.73e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.41e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-12!115;UBERON:0004121!8.40e-09!169;UBERON:0000924!2.92e-08!173;UBERON:0006601!2.92e-08!173;UBERON:0002298!6.44e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.33e-15;3!UBERON:0005174;2.33e-15;3!UBERON:0001137;2.33e-15;3!UBERON:0001896;1.97e-14;3!UBERON:0005290;1.97e-14;3!UBERON:0003127;7.66e-10;2!UBERON:0002298;1.92e-07;6!UBERON:0001723;7.80e-07;3!UBERON:0001033;7.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.23e-15,3;UBERON:0005174,2.23e-15,3;UBERON:0001137,2.23e-15,3;UBERON:0001896,1.01e-14,3;UBERON:0005290,1.01e-14,3;UBERON:0010096,1.01e-14,3;UBERON:0007023,1.50e-11,114;UBERON:0003076,5.89e-11,15;UBERON:0003057,5.89e-11,15;UBERON:0003127,7.33e-10,2;UBERON:0002298,1.39e-07,6;UBERON:0003103,2.47e-07,68;UBERON:0001723,8.29e-07,3;UBERON:0001033,8.29e-07,3;UBERON:0010056,8.29e-07,3 | |||
|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.53735113621709,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0.763976851116555,0,0,0.719792448923265,5.40617504119051,1.71495859578347,0.112131084345361,0,0.4400297149257,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59008173289419,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0.234282829985426,1.50473049863859,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0.546273504020151,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,14.4198842328038,0,0,0.0898683511473268,0,0,0.887790650732402,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.52418000472609,0,0,0,0,1.06687918137261,0,2.48578814858586,0,0,0.0633107959558787,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.916641696046735,0,0,0,0,0.806201669840715,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.18208560948797,9.12709833548967,0,0,0,4.2881719582402,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,5.73409195690071,1.44207766997908,1.8628920882415,0,0,5.45936823149932,3.14011866899464,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0.151230923763239,0,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0,0,0,1.27294061441792,0,0.464033759878494,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0.808679663052368,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,2.97726707033577,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.40781839786099,0,0,0,0.627944742804112,0,0,1.82631744101899,0,0,4.28859265059938,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0.473328002922261,0.340853619036631,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0.410651227424988,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0,0,0,1.47088993052343,0,3.33724394095407,3.56455680392503,19.8648191964198,0,0.375935671919414,1.09578409555081,0,0,0,0,0.730336388246517,0,6.73696040811821,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.735159196278759,0,4.24360710022141,2.67964130156179,0,0,0.852935927603924,0.952257725854961,0,0,0,0.12729431655633,0,1.52401723527873,1.02669990325584,0.134704106029175,1.43444410785353,1.33064142618405,0,0,0,0,0,1.1001729976458,0.406896178315738,0,1.20764276154616,0 | |phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.53735113621709,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0.763976851116555,0,0,0.719792448923265,5.40617504119051,1.71495859578347,0.112131084345361,0,0.4400297149257,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59008173289419,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0.234282829985426,1.50473049863859,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0.546273504020151,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,14.4198842328038,0,0,0.0898683511473268,0,0,0.887790650732402,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.52418000472609,0,0,0,0,1.06687918137261,0,2.48578814858586,0,0,0.0633107959558787,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.916641696046735,0,0,0,0,0.806201669840715,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.18208560948797,9.12709833548967,0,0,0,4.2881719582402,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,5.73409195690071,1.44207766997908,1.8628920882415,0,0,5.45936823149932,3.14011866899464,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0.151230923763239,0,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0,0,0,1.27294061441792,0,0.464033759878494,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0.808679663052368,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,2.97726707033577,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.40781839786099,0,0,0,0.627944742804112,0,0,1.82631744101899,0,0,4.28859265059938,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0.473328002922261,0.340853619036631,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0.410651227424988,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0,0,0,1.47088993052343,0,3.33724394095407,3.56455680392503,19.8648191964198,0,0.375935671919414,1.09578409555081,0,0,0,0,0.730336388246517,0,6.73696040811821,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.735159196278759,0,4.24360710022141,2.67964130156179,0,0,0.852935927603924,0.952257725854961,0,0,0,0.12729431655633,0,1.52401723527873,1.02669990325584,0.134704106029175,1.43444410785353,1.33064142618405,0,0,0,0,0,1.1001729976458,0.406896178315738,0,1.20764276154616,0 | ||
|short_description=p2@ARHGAP19 | |short_description=p2@ARHGAP19 | ||
}} | }} |
Latest revision as of 06:12, 20 September 2015
Short description: | p2@ARHGAP19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355366, ENST00000371027, uc001kna.2_5end |
EntrezGene: | ARHGAP19 |
HGNC: | 23724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 5.12e-07 | 3 |
cardiac muscle myoblast | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.23e-15 | 3 |
dorsal region element | 2.23e-15 | 3 |
dorsum | 2.23e-15 | 3 |
medulla oblongata | 1.01e-14 | 3 |
myelencephalon | 1.01e-14 | 3 |
future myelencephalon | 1.01e-14 | 3 |
adult organism | 1.50e-11 | 114 |
posterior neural tube | 5.89e-11 | 15 |
chordal neural plate | 5.89e-11 | 15 |
open tracheal system trachea | 7.33e-10 | 2 |
brainstem | 1.39e-07 | 6 |
compound organ | 2.47e-07 | 68 |
tongue | 8.29e-07 | 3 |
gustatory system | 8.29e-07 | 3 |
future tongue | 8.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.41e-11 | 2 |