FFCP PHASE1:Hg19::chr16:11650542..11650579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_EU446689,EU831762,EU831840_5end | |association_with_transcript=6bp_to_EU446689,EU831762,EU831840_5end | ||
|cluster_id=chr16:11650542..11650579,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_6_at_LITAF_5end | |description=CAGE_peak_6_at_LITAF_5end | ||
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|ontology_enrichment_celltype=CL:0000766!5.94e-26!76;CL:0002009!9.45e-23!65;CL:0000557!3.19e-22!71;CL:0002194!8.73e-22!63;CL:0000576!8.73e-22!63;CL:0000040!8.73e-22!63;CL:0000559!8.73e-22!63;CL:0000839!7.07e-21!70;CL:0000860!6.90e-19!45;CL:0002057!8.99e-19!42;CL:0000738!2.08e-17!140;CL:0002031!1.27e-14!124;CL:0002087!4.46e-14!119;CL:0000763!5.71e-13!112;CL:0000049!5.71e-13!112;CL:0000037!5.34e-10!172;CL:0000566!5.34e-10!172;CL:0002032!6.78e-10!165;CL:0000837!6.78e-10!165;CL:0000988!1.00e-08!182 | |ontology_enrichment_celltype=CL:0000766!5.94e-26!76;CL:0002009!9.45e-23!65;CL:0000557!3.19e-22!71;CL:0002194!8.73e-22!63;CL:0000576!8.73e-22!63;CL:0000040!8.73e-22!63;CL:0000559!8.73e-22!63;CL:0000839!7.07e-21!70;CL:0000860!6.90e-19!45;CL:0002057!8.99e-19!42;CL:0000738!2.08e-17!140;CL:0002031!1.27e-14!124;CL:0002087!4.46e-14!119;CL:0000763!5.71e-13!112;CL:0000049!5.71e-13!112;CL:0000037!5.34e-10!172;CL:0000566!5.34e-10!172;CL:0002032!6.78e-10!165;CL:0000837!6.78e-10!165;CL:0000988!1.00e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-27;33!CL:0002057;1.14e-27;33!CL:0000473;4.33e-24;39!CL:0000234;4.33e-24;39!CL:0000576;6.87e-16;48!CL:0000766;5.13e-13;69!CL:0000763;2.49e-07;100!CL:0002087;3.78e-07;104!CL:0000738;4.25e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.14e-27;33!CL:0002057;1.14e-27;33!CL:0000473;4.33e-24;39!CL:0000234;4.33e-24;39!CL:0000576;6.87e-16;48!CL:0000766;5.13e-13;69!CL:0000763;2.49e-07;100!CL:0002087;3.78e-07;104!CL:0000738;4.25e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.64e-31,72;CL:0000557,4.53e-28,67;CL:0002009,8.59e-28,61;CL:0000473,2.78e-26,48;CL:0000234,2.78e-26,48;CL:0002194,3.17e-26,59;CL:0000576,3.17e-26,59;CL:0000040,3.17e-26,59;CL:0000559,3.17e-26,59;CL:0000839,7.26e-26,66;CL:0000738,2.06e-24,136;CL:0000860,4.12e-24,42;CL:0002057,4.12e-24,42;CL:0002031,1.24e-20,120;CL:0002087,1.27e-19,115;CL:0000763,5.76e-19,108;CL:0000049,5.76e-19,108;CL:0000037,3.86e-17,168;CL:0002032,1.41e-16,161;CL:0000837,1.41e-16,161;CL:0000988,1.13e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-18;42 | |ontology_enrichment_development_v019=CL:0002057;1.09e-18;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.84e-21!102;UBERON:0003061!9.84e-21!102;UBERON:0002371!1.28e-17!80;UBERON:0002193!5.29e-17!112;UBERON:0001474!5.91e-16!86;UBERON:0004765!4.28e-14!101;UBERON:0001434!4.28e-14!101;UBERON:0002405!7.99e-12!115 | |ontology_enrichment_uberon=UBERON:0002390!9.84e-21!102;UBERON:0003061!9.84e-21!102;UBERON:0002371!1.28e-17!80;UBERON:0002193!5.29e-17!112;UBERON:0001474!5.91e-16!86;UBERON:0004765!4.28e-14!101;UBERON:0001434!4.28e-14!101;UBERON:0002405!7.99e-12!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-26,98;UBERON:0003061,1.28e-26,98;UBERON:0002371,6.55e-24,76;UBERON:0002193,3.51e-23,108;UBERON:0001474,5.10e-22,82;UBERON:0004765,1.58e-18,90;UBERON:0002405,4.52e-18,93;UBERON:0001434,5.10e-15,100;UBERON:0003081,4.82e-09,203 | |||
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| ||
|short_description=p6@LITAF | |short_description=p6@LITAF | ||
}} | }} |
Latest revision as of 06:22, 20 September 2015
Short description: | p6@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LITAF_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 6bp_to_EU446689, EU831762, EU831840_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.64e-31 | 72 |
granulocyte monocyte progenitor cell | 4.53e-28 | 67 |
macrophage dendritic cell progenitor | 8.59e-28 | 61 |
defensive cell | 2.78e-26 | 48 |
phagocyte | 2.78e-26 | 48 |
monopoietic cell | 3.17e-26 | 59 |
monocyte | 3.17e-26 | 59 |
monoblast | 3.17e-26 | 59 |
promonocyte | 3.17e-26 | 59 |
myeloid lineage restricted progenitor cell | 7.26e-26 | 66 |
leukocyte | 2.06e-24 | 136 |
classical monocyte | 4.12e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.12e-24 | 42 |
hematopoietic lineage restricted progenitor cell | 1.24e-20 | 120 |
nongranular leukocyte | 1.27e-19 | 115 |
myeloid cell | 5.76e-19 | 108 |
common myeloid progenitor | 5.76e-19 | 108 |
hematopoietic stem cell | 3.86e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.41e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-16 | 161 |
hematopoietic cell | 1.13e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-26 | 98 |
blood island | 1.28e-26 | 98 |
bone marrow | 6.55e-24 | 76 |
hemolymphoid system | 3.51e-23 | 108 |
bone element | 5.10e-22 | 82 |
skeletal element | 1.58e-18 | 90 |
immune system | 4.52e-18 | 93 |
skeletal system | 5.10e-15 | 100 |
lateral plate mesoderm | 4.82e-09 | 203 |