FFCP PHASE1:Hg19::chr9:116267536..116267547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VXC0 | |UniProt=Q5VXC0 | ||
|association_with_transcript=0bp_to_ENST00000374136,uc004bhu.2_5end | |association_with_transcript=0bp_to_ENST00000374136,uc004bhu.2_5end | ||
|cluster_id=chr9:116267536..116267547,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_40_at_RGS3_5end | |description=CAGE_peak_40_at_RGS3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002379!1.99e-09!1;CL:0000181!7.69e-07!12;CL:0000417!7.69e-07!12;CL:0000668!7.69e-07!12;CL:0000414!7.69e-07!12;CL:0000412!7.69e-07!12;CL:0000182!7.69e-07!12 | |ontology_enrichment_celltype=CL:0002379!1.99e-09!1;CL:0000181!7.69e-07!12;CL:0000417!7.69e-07!12;CL:0000668!7.69e-07!12;CL:0000414!7.69e-07!12;CL:0000412!7.69e-07!12;CL:0000182!7.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-30;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.81e-30;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-30,12;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.28e-21;31 | |ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.28e-21;31 | ||
|ontology_enrichment_disease=DOID:3620!1.99e-09!1;DOID:3565!1.99e-09!1 | |ontology_enrichment_disease=DOID:3620!1.99e-09!1;DOID:3565!1.99e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:7;1.98e-10;39 | |ontology_enrichment_disease_v019=DOID:7;1.98e-10;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,5.37e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.77e-11!19;UBERON:0006925!8.77e-11!19;UBERON:0008836!8.77e-11!19;UBERON:0001301!2.35e-09!1;UBERON:0008835!2.76e-09!22;UBERON:0003894!2.76e-09!22;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0009854!7.15e-09!23;UBERON:0005172!2.28e-08!55;UBERON:0005173!2.28e-08!55;UBERON:0007499!3.82e-08!25;UBERON:0009497!3.82e-08!25;UBERON:0000015!3.82e-08!25;UBERON:0002423!3.82e-08!25;UBERON:0006235!3.82e-08!25;UBERON:0004161!3.82e-08!25;UBERON:0002368!4.95e-08!35;UBERON:0005057!8.01e-08!26;UBERON:0009856!8.01e-08!26;UBERON:0002417!1.94e-07!61;UBERON:0000916!1.94e-07!61 | |ontology_enrichment_uberon=UBERON:0002107!8.77e-11!19;UBERON:0006925!8.77e-11!19;UBERON:0008836!8.77e-11!19;UBERON:0001301!2.35e-09!1;UBERON:0008835!2.76e-09!22;UBERON:0003894!2.76e-09!22;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0009854!7.15e-09!23;UBERON:0005172!2.28e-08!55;UBERON:0005173!2.28e-08!55;UBERON:0007499!3.82e-08!25;UBERON:0009497!3.82e-08!25;UBERON:0000015!3.82e-08!25;UBERON:0002423!3.82e-08!25;UBERON:0006235!3.82e-08!25;UBERON:0004161!3.82e-08!25;UBERON:0002368!4.95e-08!35;UBERON:0005057!8.01e-08!26;UBERON:0009856!8.01e-08!26;UBERON:0002417!1.94e-07!61;UBERON:0000916!1.94e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-34;19!UBERON:0006925;7.35e-34;19!UBERON:0002423;5.94e-26;25!UBERON:0002365;4.69e-19;31!UBERON:0002330;4.69e-19;31!UBERON:0002368;4.74e-19;33!UBERON:0000949;1.32e-12;43!UBERON:0002417;3.43e-08;58!UBERON:0000916;3.43e-08;58!UBERON:0002530;1.05e-07;57!UBERON:0005172;1.06e-07;52!UBERON:0005173;1.06e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-34;19!UBERON:0006925;7.35e-34;19!UBERON:0002423;5.94e-26;25!UBERON:0002365;4.69e-19;31!UBERON:0002330;4.69e-19;31!UBERON:0002368;4.74e-19;33!UBERON:0000949;1.32e-12;43!UBERON:0002417;3.43e-08;58!UBERON:0000916;3.43e-08;58!UBERON:0002530;1.05e-07;57!UBERON:0005172;1.06e-07;52!UBERON:0005173;1.06e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0004921,6.01e-09,118;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005177,6.11e-07,101;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p40@RGS3 | |short_description=p40@RGS3 | ||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p40@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_RGS3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000374136, uc004bhu.2_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | Q5VXC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-30 | 12 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
subdivision of digestive tract | 6.01e-09 | 118 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
trunk region element | 6.11e-07 | 101 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.37e-10 | 39 |