FFCP PHASE1:Hg19::chr9:116279713..116279734,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000460000_5end | |association_with_transcript=65bp_to_ENST00000460000_5end | ||
|cluster_id=chr9:116279713..116279734,+ | |||
|coexpression_cluster_id=C2801 | |||
|description=CAGE_peak_15_at_RGS3_5end | |description=CAGE_peak_15_at_RGS3_5end | ||
|id=chr9:116279713..116279734,+ | |id=chr9:116279713..116279734,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.48e-35!52;CL:0000542!2.68e-34!53;CL:0000051!2.68e-34!53;CL:0000791!5.62e-26!18;CL:0000789!5.62e-26!18;CL:0002420!5.62e-26!18;CL:0002419!5.62e-26!18;CL:0000790!5.62e-26!18;CL:0000084!2.32e-24!25;CL:0000827!2.32e-24!25;CL:0000738!6.83e-22!140;CL:0000625!3.21e-20!11;CL:0002087!1.52e-19!119;CL:0002031!6.47e-16!124;CL:0000037!8.30e-16!172;CL:0000566!8.30e-16!172;CL:0000988!1.38e-15!182;CL:0002032!1.79e-13!165;CL:0000837!1.79e-13!165;CL:0000945!5.04e-09!24;CL:0000826!5.04e-09!24;CL:0000623!2.83e-07!3;CL:0000825!2.83e-07!3;CL:0000080!4.58e-07!6;CL:0000767!7.68e-07!3 | |ontology_enrichment_celltype=CL:0000838!3.48e-35!52;CL:0000542!2.68e-34!53;CL:0000051!2.68e-34!53;CL:0000791!5.62e-26!18;CL:0000789!5.62e-26!18;CL:0002420!5.62e-26!18;CL:0002419!5.62e-26!18;CL:0000790!5.62e-26!18;CL:0000084!2.32e-24!25;CL:0000827!2.32e-24!25;CL:0000738!6.83e-22!140;CL:0000625!3.21e-20!11;CL:0002087!1.52e-19!119;CL:0002031!6.47e-16!124;CL:0000037!8.30e-16!172;CL:0000566!8.30e-16!172;CL:0000988!1.38e-15!182;CL:0002032!1.79e-13!165;CL:0000837!1.79e-13!165;CL:0000945!5.04e-09!24;CL:0000826!5.04e-09!24;CL:0000623!2.83e-07!3;CL:0000825!2.83e-07!3;CL:0000080!4.58e-07!6;CL:0000767!7.68e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.40e-33;11!CL:0000791;1.41e-19;18!CL:0000789;1.41e-19;18!CL:0002419;1.41e-19;18!CL:0000542;1.11e-16;53!CL:0000084;2.01e-16;25!CL:0000945;2.92e-14;24!CL:0000623;2.45e-13;3!CL:0000767;1.50e-12;3!CL:0000226;1.43e-11;3!CL:0000842;1.43e-11;3!CL:0002087;4.85e-10;104!CL:0000094;6.92e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.95e-37,52;CL:0000542,1.30e-36,53;CL:0000051,1.30e-36,53;CL:0000625,1.39e-33,11;CL:0000738,3.83e-26,136;CL:0002087,1.52e-22,115;CL:0000791,1.02e-19,18;CL:0000789,1.02e-19,18;CL:0002420,1.02e-19,18;CL:0002419,1.02e-19,18;CL:0000790,1.02e-19,18;CL:0000037,1.39e-19,168;CL:0000988,3.62e-18,177;CL:0002031,1.17e-16,120;CL:0000084,1.55e-16,25;CL:0000827,1.55e-16,25;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000945,2.84e-14,24;CL:0000826,2.84e-14,24;CL:0000623,2.46e-13,3;CL:0000825,2.46e-13,3;CL:0000767,1.90e-12,3;CL:0000226,1.46e-11,3;CL:0000842,1.46e-11,3;CL:0000094,7.32e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.41e-19;18!CL:0000051;1.11e-16;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.78e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.09e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.11e-17!15;UBERON:0000179!1.11e-17!15;UBERON:0000463!1.11e-17!15;UBERON:0004177!5.34e-11!7;UBERON:0007023!6.14e-07!115;UBERON:0002370!8.56e-07!4;UBERON:0005058!8.56e-07!4;UBERON:0009113!8.56e-07!4;UBERON:0003295!8.56e-07!4;UBERON:0005562!8.56e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!1.11e-17!15;UBERON:0000179!1.11e-17!15;UBERON:0000463!1.11e-17!15;UBERON:0004177!5.34e-11!7;UBERON:0007023!6.14e-07!115;UBERON:0002370!8.56e-07!4;UBERON:0005058!8.56e-07!4;UBERON:0009113!8.56e-07!4;UBERON:0003295!8.56e-07!4;UBERON:0005562!8.56e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.89e-18;15!UBERON:0000179;2.89e-18;15!UBERON:0000463;2.89e-18;15!UBERON:0002390;4.83e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.09e-18,15;UBERON:0000179,3.09e-18,15;UBERON:0000463,3.09e-18,15 | |||
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| ||
|short_description=p15@RGS3 | |short_description=p15@RGS3 | ||
}} | }} |
Latest revision as of 07:07, 20 September 2015
Short description: | p15@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RGS3_5end |
Coexpression cluster: | C2801_Natural_B_CD8_xeroderma_CD34_plasma_Basophils |
Association with transcript: | 65bp_to_ENST00000460000_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.95e-37 | 52 |
lymphocyte | 1.30e-36 | 53 |
common lymphoid progenitor | 1.30e-36 | 53 |
CD8-positive, alpha-beta T cell | 1.39e-33 | 11 |
leukocyte | 3.83e-26 | 136 |
nongranular leukocyte | 1.52e-22 | 115 |
mature alpha-beta T cell | 1.02e-19 | 18 |
alpha-beta T cell | 1.02e-19 | 18 |
immature T cell | 1.02e-19 | 18 |
mature T cell | 1.02e-19 | 18 |
immature alpha-beta T cell | 1.02e-19 | 18 |
hematopoietic stem cell | 1.39e-19 | 168 |
hematopoietic cell | 3.62e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 1.17e-16 | 120 |
T cell | 1.55e-16 | 25 |
pro-T cell | 1.55e-16 | 25 |
hematopoietic oligopotent progenitor cell | 2.17e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-15 | 161 |
lymphocyte of B lineage | 2.84e-14 | 24 |
pro-B cell | 2.84e-14 | 24 |
natural killer cell | 2.46e-13 | 3 |
pro-NK cell | 2.46e-13 | 3 |
basophil | 1.90e-12 | 3 |
single nucleate cell | 1.46e-11 | 3 |
mononuclear cell | 1.46e-11 | 3 |
granulocyte | 7.32e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 3.09e-18 | 15 |
haemolymphatic fluid | 3.09e-18 | 15 |
organism substance | 3.09e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.09e-09 | 10 |