FFCP PHASE1:Hg19::chr12:7052974..7052985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113246 | |EntrezGene=113246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34033,29521 | |HGNC=34033,29521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000458811,ENST00000544681_5end | |association_with_transcript=0bp_to_ENST00000458811,ENST00000544681_5end | ||
|cluster_id=chr12:7052974..7052985,+ | |||
|coexpression_cluster_id=C898 | |coexpression_cluster_id=C898 | ||
|description=CAGE_peak_1_at_RNU7-1_5end,CAGE_peak_4_at_C12orf57_5end | |description=CAGE_peak_1_at_RNU7-1_5end,CAGE_peak_4_at_C12orf57_5end | ||
|id=chr12:7052974..7052985,+ | |id=chr12:7052974..7052985,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.66e-21!42;CL:0002031!3.72e-21!124;CL:0000738!9.54e-21!140;CL:0000860!1.52e-20!45;CL:0002087!1.75e-19!119;CL:0000037!2.64e-19!172;CL:0000566!2.64e-19!172;CL:0002032!2.20e-18!165;CL:0000837!2.20e-18!165;CL:0000988!3.20e-16!182;CL:0000839!5.88e-14!70;CL:0000557!8.54e-14!71;CL:0002009!2.96e-13!65;CL:0000766!9.59e-13!76;CL:0002194!2.38e-12!63;CL:0000576!2.38e-12!63;CL:0000040!2.38e-12!63;CL:0000559!2.38e-12!63;CL:0000763!2.62e-11!112;CL:0000049!2.62e-11!112;CL:0000542!2.44e-07!53;CL:0000051!2.44e-07!53;CL:0000838!5.50e-07!52 | |ontology_enrichment_celltype=CL:0002057!1.66e-21!42;CL:0002031!3.72e-21!124;CL:0000738!9.54e-21!140;CL:0000860!1.52e-20!45;CL:0002087!1.75e-19!119;CL:0000037!2.64e-19!172;CL:0000566!2.64e-19!172;CL:0002032!2.20e-18!165;CL:0000837!2.20e-18!165;CL:0000988!3.20e-16!182;CL:0000839!5.88e-14!70;CL:0000557!8.54e-14!71;CL:0002009!2.96e-13!65;CL:0000766!9.59e-13!76;CL:0002194!2.38e-12!63;CL:0000576!2.38e-12!63;CL:0000040!2.38e-12!63;CL:0000559!2.38e-12!63;CL:0000763!2.62e-11!112;CL:0000049!2.62e-11!112;CL:0000542!2.44e-07!53;CL:0000051!2.44e-07!53;CL:0000838!5.50e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-21;33!CL:0002057;2.00e-21;33!CL:0000576;8.97e-15;48!CL:0000473;4.59e-14;39!CL:0000234;4.59e-14;39!CL:0000766;5.02e-11;69!CL:0002087;1.69e-10;104!CL:0000738;2.76e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.30e-29,120;CL:0000738,2.75e-29,136;CL:0000860,8.32e-29,42;CL:0002057,8.32e-29,42;CL:0002087,2.89e-27,115;CL:0000037,1.83e-25,168;CL:0002032,2.21e-24,161;CL:0000837,2.21e-24,161;CL:0000473,7.05e-24,48;CL:0000234,7.05e-24,48;CL:0000988,2.67e-22,177;CL:0000557,1.10e-20,67;CL:0000766,4.88e-20,72;CL:0000839,6.14e-20,66;CL:0002009,2.78e-19,61;CL:0002194,5.50e-18,59;CL:0000576,5.50e-18,59;CL:0000040,5.50e-18,59;CL:0000559,5.50e-18,59;CL:0000763,9.94e-15,108;CL:0000049,9.94e-15,108;CL:0000542,1.78e-09,53;CL:0000051,1.78e-09,53;CL:0000838,5.40e-09,52;CL:0002393,5.89e-07,9;CL:0002397,5.89e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-11!80;UBERON:0001474!4.13e-10!86;UBERON:0002390!7.55e-09!102;UBERON:0003061!7.55e-09!102;UBERON:0002405!9.35e-08!115;UBERON:0004765!1.00e-07!101;UBERON:0001434!1.00e-07!101;UBERON:0001049!2.33e-07!57;UBERON:0005068!2.33e-07!57;UBERON:0006241!2.33e-07!57;UBERON:0007135!2.33e-07!57;UBERON:0002193!6.44e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!5.21e-11!80;UBERON:0001474!4.13e-10!86;UBERON:0002390!7.55e-09!102;UBERON:0003061!7.55e-09!102;UBERON:0002405!9.35e-08!115;UBERON:0004765!1.00e-07!101;UBERON:0001434!1.00e-07!101;UBERON:0001049!2.33e-07!57;UBERON:0005068!2.33e-07!57;UBERON:0006241!2.33e-07!57;UBERON:0007135!2.33e-07!57;UBERON:0002193!6.44e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.13e-17,76;UBERON:0002405,1.64e-15,93;UBERON:0002390,2.54e-15,98;UBERON:0003061,2.54e-15,98;UBERON:0001474,2.65e-15,82;UBERON:0004765,9.09e-13,90;UBERON:0002193,1.05e-12,108;UBERON:0001434,3.70e-11,100 | |||
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| ||
|short_description=p1@RNU7-1,p4@C12orf57 | |short_description=p1@RNU7-1,p4@C12orf57 | ||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p1@RNU7-1, p4@C12orf57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNU7-1_5end, CAGE_peak_4_at_C12orf57_5end |
Coexpression cluster: | C898_CD14_Mast_Basophils_Natural_CD19_immature_CD8 |
Association with transcript: | 0bp_to_ENST00000458811, ENST00000544681_5end |
EntrezGene: | C12orf57 |
HGNC: | 29521&submit=Submit 34033, 29521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.30e-29 | 120 |
leukocyte | 2.75e-29 | 136 |
classical monocyte | 8.32e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-29 | 42 |
nongranular leukocyte | 2.89e-27 | 115 |
hematopoietic stem cell | 1.83e-25 | 168 |
hematopoietic oligopotent progenitor cell | 2.21e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-24 | 161 |
defensive cell | 7.05e-24 | 48 |
phagocyte | 7.05e-24 | 48 |
hematopoietic cell | 2.67e-22 | 177 |
granulocyte monocyte progenitor cell | 1.10e-20 | 67 |
myeloid leukocyte | 4.88e-20 | 72 |
myeloid lineage restricted progenitor cell | 6.14e-20 | 66 |
macrophage dendritic cell progenitor | 2.78e-19 | 61 |
monopoietic cell | 5.50e-18 | 59 |
monocyte | 5.50e-18 | 59 |
monoblast | 5.50e-18 | 59 |
promonocyte | 5.50e-18 | 59 |
myeloid cell | 9.94e-15 | 108 |
common myeloid progenitor | 9.94e-15 | 108 |
lymphocyte | 1.78e-09 | 53 |
common lymphoid progenitor | 1.78e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.40e-09 | 52 |
intermediate monocyte | 5.89e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.13e-17 | 76 |
immune system | 1.64e-15 | 93 |
hematopoietic system | 2.54e-15 | 98 |
blood island | 2.54e-15 | 98 |
bone element | 2.65e-15 | 82 |
skeletal element | 9.09e-13 | 90 |
hemolymphoid system | 1.05e-12 | 108 |
skeletal system | 3.70e-11 | 100 |