FFCP PHASE1:Hg19::chr7:98870482..98870519,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:98870482..98870519,+
|short_description=p2@MYH16
|description=CAGE_peak_2_at_MYH16_5end
|association_with_transcript=-404bp_to_ENST00000330888,NR_002147,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84176 | |EntrezGene=84176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31038 | |HGNC=31038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-404bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | |||
|cluster_id=chr7:98870482..98870519,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_2_at_MYH16_5end | |||
|id=chr7:98870482..98870519,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.89e-23!254;CL:0000076!1.02e-13!62;CL:0002076!9.65e-11!43;CL:0000071!1.45e-10!18;CL:0002546!1.45e-10!18;CL:0002621!5.14e-10!3;CL:0002139!2.68e-09!24;CL:0000223!4.71e-09!59;CL:1000497!1.18e-08!18;CL:0002518!1.18e-08!18;CL:1000507!6.19e-08!12;CL:1000494!6.19e-08!12;CL:0002543!2.31e-07!6;CL:0000063!3.50e-07!578;CL:0002327!3.83e-07!4;CL:0002368!6.68e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;5.70e-34;3!CL:0002166;1.65e-15;3!CL:0002327;7.11e-12;4!CL:0002535;6.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.44e-34,3;CL:0002166,1.53e-15,3;CL:0002327,6.03e-12,4;CL:0000066,1.96e-10,253;CL:0002535,6.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.84e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.85e-08;14!DOID:4929;4.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.85e-08,14;DOID:4929,4.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.45e-10!18;UBERON:0004638!1.45e-10!18;UBERON:0004852!1.45e-10!18;UBERON:0000487!2.66e-10!22;UBERON:0001949!5.14e-10!3;UBERON:0006914!8.05e-09!25;UBERON:0009773!6.19e-08!12;UBERON:0001231!6.19e-08!12;UBERON:0004810!6.19e-08!12;UBERON:0006554!1.34e-07!44;UBERON:0001008!2.29e-07!45;UBERON:0001911!3.83e-07!4;UBERON:0005333!3.83e-07!4;UBERON:0008425!3.83e-07!4;UBERON:0005311!3.83e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.70e-34;3!UBERON:0000486;3.23e-15;12!UBERON:0003929;5.95e-15;7!UBERON:0003350;3.70e-13;8!UBERON:0001828;3.70e-13;8!UBERON:0004913;7.88e-13;1!UBERON:0003703;7.88e-13;1!UBERON:0001174;7.88e-13;1!UBERON:0004914;7.88e-13;1!UBERON:0001911;7.11e-12;4!UBERON:0001708;7.11e-12;4!UBERON:0008895;7.11e-12;4!UBERON:0011159;1.11e-09;5!UBERON:0004807;2.33e-08;22!UBERON:0003729;2.64e-08;13!UBERON:0006955;6.61e-07;2!UBERON:0004801;6.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.44e-34,3;UBERON:0003350,3.07e-13,8;UBERON:0001828,3.07e-13,8;UBERON:0004913,7.89e-13,1;UBERON:0003703,7.89e-13,1;UBERON:0001174,7.89e-13,1;UBERON:0004914,7.89e-13,1;UBERON:0001911,6.03e-12,4;UBERON:0005333,6.03e-12,4;UBERON:0008425,6.03e-12,4;UBERON:0005311,6.03e-12,4;UBERON:0001708,6.73e-12,4;UBERON:0008895,6.73e-12,4;UBERON:0011159,1.06e-09,5;UBERON:0003729,2.36e-08,13;UBERON:0010188,3.13e-08,6;UBERON:0002539,3.13e-08,6;UBERON:0008816,3.13e-08,6;UBERON:0006955,6.42e-07,2;UBERON:0004801,6.42e-07,2 | |||
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| ||
|short_description=p2@MYH16 | |||
}} | }} |
Latest revision as of 07:58, 20 September 2015
Short description: | p2@MYH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYH16_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -404bp_to_ENST00000330888, NR_002147, uc003upw.2_5end |
EntrezGene: | MYH16 |
HGNC: | 31038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.44e-34 | 3 |
epithelial cell of Malassez | 1.53e-15 | 3 |
mammary gland epithelial cell | 6.03e-12 | 4 |
epithelial cell | 1.96e-10 | 253 |
epithelial cell of cervix | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.44e-34 | 3 |
epithelium of mucosa | 3.07e-13 | 8 |
gingiva | 3.07e-13 | 8 |
hepatopancreatic ampulla | 7.89e-13 | 1 |
extrahepatic bile duct | 7.89e-13 | 1 |
common bile duct | 7.89e-13 | 1 |
duodenal papilla | 7.89e-13 | 1 |
mammary gland | 6.03e-12 | 4 |
mammary bud | 6.03e-12 | 4 |
mammary ridge | 6.03e-12 | 4 |
mammary placode | 6.03e-12 | 4 |
jaw skeleton | 6.73e-12 | 4 |
splanchnocranium | 6.73e-12 | 4 |
primary subdivision of cranial skeletal system | 1.06e-09 | 5 |
mouth mucosa | 2.36e-08 | 13 |
protuberance | 3.13e-08 | 6 |
pharyngeal arch | 3.13e-08 | 6 |
embryonic head | 3.13e-08 | 6 |
uterine epithelium | 6.42e-07 | 2 |
cervix epithelium | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.85e-08 | 14 |
tubular adenocarcinoma | 4.83e-07 | 2 |